AMCG00021730


Basic Information

Item Value
gene id AMCG00021730
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 27010869 ~ 27011910 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021730
ATGGATCGGTACAATGATTTGAAAGTGTTGTTGAAGAGCTGGGAGTATTCCTTCGtccaggaaaacaaaaggaagcCGAATAAGaacTGTACAAAGAATACAGAGTTCTCAAACAAGAAAGAGAGAATGCAACTGTTGACAGAACCGGCAATGAAAACTCCGGGAAAGAGTGCCAAGATCAGTCCACGAAGGTCCAAACAGCTGAAAAGgaGGCAGATTGTTGGGGAGCTCATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021730 True 237 mRNA 0.44 3 27010869 27011910

Neighbor

gene id symbol gene type direction distance location
AMCG00021729 NA coding upstream 8299 27001117 ~ 27002570 (+)
AMCG00021726 bop1,LOC107693294,LOC107753474,LOC107669991 coding upstream 31970 26954157 ~ 26978899 (+)
AMCG00021722 NA coding upstream 144992 26849878 ~ 26865877 (+)
AMCG00021721 NA coding upstream 165992 26836840 ~ 26844877 (+)
AMCG00021720 ptp4a3,LOC103029087,LOC108436585,LOC107587801,LOC107714615,LOC107552859,LOC107704902,LOC107724783 coding upstream 207884 26784119 ~ 26802985 (+)
AMCG00021728 LOC102788509,LOC106570431,LOC106588958 coding downstream 12 27011922 ~ 27024907 (+)
AMCG00021727 NA coding downstream 14237 27026147 ~ 27054066 (+)
AMCG00021733 scrt1,scrt1b,LOC105018847,LOC105904905,LOC107741724,LOC105910659,LOC107587804 coding downstream 109421 27121331 ~ 27123223 (+)
AMCG00021734 NA coding downstream 249929 27261839 ~ 27287320 (+)
AMCG00021737 NA coding downstream 283179 27295089 ~ 27315993 (+)
G87993 NA non-coding upstream 104504 26896725 ~ 26906365 (+)
G87962 csk21,LOC107734013,LOC108425256,LOC105910791,LOC105902032,LOC105022821,LOC108267736 non-coding upstream 193587 26813030 ~ 26817282 (+)
G87961 NA non-coding upstream 200002 26808257 ~ 26810867 (+)
G87942 NA non-coding upstream 272986 26720909 ~ 26737883 (+)
G87939 NA non-coding upstream 297393 26710217 ~ 26713476 (+)
G88024 NA non-coding downstream 45464 27057374 ~ 27057611 (+)
G88025 NA non-coding downstream 48272 27060182 ~ 27060389 (+)
G88026 NA non-coding downstream 49909 27061819 ~ 27062090 (+)
G88027 NA non-coding downstream 51653 27063563 ~ 27063951 (+)
G88043 NA non-coding downstream 126917 27138827 ~ 27139443 (+)
AMCG00021707 NA other upstream 441721 26535093 ~ 26569148 (+)
AMCG00021703 galnt12 other upstream 813793 26152068 ~ 26197076 (+)
AMCG00021693 NA other upstream 1140674 25843694 ~ 25870195 (+)
AMCG00021692 NA other upstream 1257616 25752357 ~ 25753253 (+)
AMCG00021682 NA other upstream 1638530 25276776 ~ 25372339 (+)
AMCG00021745 NA other downstream 621005 27632915 ~ 27637084 (+)
G88238 NA other downstream 1766405 28778315 ~ 28778733 (+)
G88276 NA other downstream 2048977 29060887 ~ 29065339 (+)
AMCG00021772 NA other downstream 2252917 29264827 ~ 29275347 (+)
AMCG00021779 LOC108438266,LOC105891906 other downstream 2366665 29378575 ~ 29385325 (+)

Expression


Co-expression Network