AMCG00021732


Basic Information

Item Value
gene id AMCG00021732
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 27054043 ~ 27064071 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021732
GTCATCTGTGACAGAAAATCATTGATGACAACACAGGATATTGGAAAGGTGAGCTTTGCAGATCTTTCAGTTTTATGGAAGGGTGAAAATGCATAAAGCGTCCTCTGAGCCAATCAAATGAGCCTGGAgtagagaaggagagagaataGTCAGCCGTAGATTAGATATTCACAAGTATAAGCTGCTGTATAGGAACCAAAATCGGCTCTGAAGTGCCCAGAATCCAATCATAAATACAGTGGAAGACCTTTCTTCAAACCATCACTTTTTCTCAACTTTTGTCTGCTGCACATATGAAATCAATGGCATCCCTGCGGGTGCTTTGGCCAGGCTTCCTTCTGTGTCAAATTCTGGACATGTCCAATGGAGCGCCATCCTCCAGAGACGAGGTTTTTGGGAAGGTCGTGGGCATGGTGTCACCTGGAGCAGCCTTCCTCAGTGAGAATGCTGTTCACTCCTTTTTGAATATGTTGGAGAAACGTGTGCAATGTCTCGATGTGTCGTGTGGAAAGtgtCTCTCTCCTGAGAGTTTGTCTCAGCTCTCCAGCAGTTTCCCGGTAGACAGTGTTCGCAGTGAAGACTTTTTCGCGGTCGCGGCTGGATTGTGTTTCTACCTGAGCAGTCCTCTCGAAGCCTGTCTTGCTGTGAAGGAAAGCAGGTGGCAGAGGGAGACAAACGCTTTTGTTGAGCGTGTCAAAGACATCGAAGGAGAGGGCCTCAGCCACGTGGTAGATCACTTGCTCGACAAAATTCAAAGGCATTACCTAGCAACAGGCAGAGATCAGCCTTGTCTCACAGGAAGTCACATTCTTGAAGAAAGCAACATTTCCTCAAGTGATGAATTCACACAGAGCATTGACGTTGTCTTCGGCAACATCATTTACCATGTGCTCAGAGGGGATTGTATGAGTGTGCGAGTTCTGCCAGCAGGAGAATATTTTCTGGATTATATTTTTGATCATGTTCAGAATGGATCTGATAACATGTCATTAGAAGGTTTAGCACATATCATGCTTCATCTGGATTTGGGAAGCATCAAGGATCATGAGGCAGAGCATGACCACAAGCAGCACAGCCAAAGACACGGACAAGAGCATCATACCAATAACGGGGACTCGAGGTGTTTCTCTGCCCAGGAGATGTTGGAGGTTTATCATTTTAACAGCAGCTCTGGACTGTCACGGGCCCAGTTCACAGAGCTAAGTCCAGCACTCATCCAACAGCTACTCAGCAAAGCATGTGTACAGACTCCTAGCCAGCCAGAAACCATCCAACAACTCACCACCACGGAGCTGTATGTTTATGCATCTGTTGCAAACCTGGTGATCTGCCTGTTCGCACCACTTGGGATTGTGATAATGCTGTGCAGCTCCTGCAGTGGCGTCTTTCAGTACATCATTCAGTTCTGCATCAGCCTGGCCGTGGGCTCGCTCAGCGGGGACGCCATTCTGCATCTCCTGCCACAGtttCTCGGTCTCCATGTGCACTCGACTGAGCCCCATGGATCTGGAGAAAGCATGGATTACATCTGGAAGCTGTTGGTGCTCCTGGTGGGAATCTACGTGTTCTTCCTGATGGAGACCATTTTCTCCATCATAATGCACCCACATCCACATCAGAATGAGTCAGAGGATACCCACCACTGTGACCATGGTACAGTTTTGCAGATCTACCAGGAGGGACAAAAGAGCAGCCAGTCCGCCTCACAGGCTGACCTGGTTAAACAAGAGGAGGCTGATAAATCCTTTCCTGTCTCTGAGTGTTTGACCAGAGAGCAGCGCATGCTTCCCTACATGATCACAATAGGCGACGGGATCCATAACTTCGCGGATGGCCTGGCTGTGGGAGCTGCCTTTTCAATCTCGTGGAATTCAGGGCTGGCCACCTCACTAGCGGTGCTCTGTCACGAGATCCCTCATGAACTTGGTGATTTTGCGGTTCTACTACATTCTGGAATCACAGTGAAGAACGCTGTCCTGTTGAACTTGGGCAGTGCTCTGACATCCTTCATTGGTCTCTACATCGCCCTCTCGGTATCCACCAATCAGATAGCCAAGGAATGGATCTCTGCAATTACAGCTGGCTTATTTCTATATGTGGCTCTAGTGGACATGCTCCCTTCCATGACGCATGTGAAAAGTAACAGGccgttgttattttttttccttcataattTGGGGCTTCTGGTTGGCTGGGCAATATTACTGCTCCTCTCTTTGTATGAAGATGATATTGGTTTCTAAAGCTGGGCTCCAGCAAGATGAAAGATTTCACAAATATTCAAGAATTATACTAAAGTTGTATCAGAGTTCAGTGTGAAAtgtcaattttttttgtatttctttctttatggcAGATATTAAGTCACACAGTGGTTGTATAGATTAAGTCAAAAGGCTAATGCATAatgcttttctgtcttttagACATTGTCAGTTAAAGTGCTTTTGGGGAAATAAAGTTTCTGATGACAAAATGAAGGTCCTCAGATTAAAAACAGATGTGCAATATacttaaaaatctatttttctaATGAAATCTTTTACTTTTGAGAGTTGTTTTCCTTGTATAAAGTGCtgtattttggcatttgtttaaatatacattattttttaaggaaaaagAAAGGGCAGGCCaagatgaataaaatatttattttacaaagtaaCCTTTCTATTTATAATGATGAGCAACTTGAGTGCATGAATTATCCATTATAGTTCACTGGTTTTCCTTGCCTGTGTCTTTCCAAAGATAATGTTATCATGTTCCCAGATGGCACATGCTTTAGTGTGTGCAAGGCAGGGGAATATATGAGCCAAACATCTATTAAAGGTCCTGTAAAGATAAAACTGCATCAAAGGTGAATGAATAAACCCACAAGCACTGACTAGGCAACATTATTTATCTCCAGAATGTTCAGCTGCAACAGTTGTCAACCCAGAAGTCTTCTGCACAAGCTGCTCTGTGTTTACTCCAGTTAGTTTATGCTGTTTTCCACAAGGAAGGCCGTCTTCATTTGTAACAACATTTGTGAcatgaaaacaattattaagacttgtggcattttaaaattatatgagCTCTGTATTAAGTCCAGGTTGTAGGGTCATTAAGTCTTTAGTTGATTAGTCAAAGTTCAAAATATCCGAAGTAATCTTGATCCAAGACCAATTAATACTATTGTGTATCTTTCAAAGGTTTGGTAAGCATAATACTTGTAATACAGATTCTGGTAAAGTATTGTAGACATGCTAGTTACTGATTtgtgcaacaaaaataaaaatgttttattattttgcctttgttttttattcataattgaCTTGATGGTAAGGTGTTGATGGTAAGAACTTAATCCGTGACCattaatttcacaataaaacataggTCATGGGTACTATGAAGATTAGTTCTGAATCTTTCatgaatcataaaatatatgaaatgggGCAACAAACGGGTCAAATGGAA

Function

GO: NA

KEGG:

id description
K14710 SLC39A4, ZIP4; solute carrier family 39 (zinc transporter), member 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021732 True 3474 mRNA 0.42 12 27054043 27064071

Neighbor

gene id symbol gene type direction distance location
AMCG00021731 brp16,LOC107589436 coding downstream 44139 27004481 ~ 27009904 (-)
AMCG00021725 NA coding downstream 107353 26946172 ~ 26946690 (-)
AMCG00021724 csk21,LOC105902032,LOC105022821,LOC107589440,LOC107693292,LOC107559708,LOC105910791,LOC107670008 coding downstream 229745 26805040 ~ 26824298 (-)
AMCG00021716 NA coding downstream 397959 26643754 ~ 26656084 (-)
AMCG00021709 NA coding downstream 487105 26564206 ~ 26566938 (-)
AMCG00021736 NA coding upstream 132021 27196092 ~ 27202305 (-)
AMCG00021735 LOC105904932,LOC108429636 coding upstream 172503 27236574 ~ 27261351 (-)
AMCG00021738 cfap20 coding upstream 223181 27287252 ~ 27291996 (-)
AMCG00021743 NA coding upstream 352199 27416270 ~ 27440262 (-)
AMCG00021744 rplp1 coding upstream 520349 27584420 ~ 27587139 (-)
G87992 NA non-coding downstream 158707 26892476 ~ 26895336 (-)
G87980 NA non-coding downstream 253328 26798091 ~ 26800715 (-)
G87884 NA non-coding downstream 616150 26432144 ~ 26437893 (-)
G87883 gabbr2 non-coding downstream 635144 26418680 ~ 26418899 (-)
G87882 NA non-coding downstream 658864 26394951 ~ 26395179 (-)
G88095 NA non-coding upstream 345352 27409423 ~ 27409711 (-)
G88153 NA non-coding upstream 555749 27619820 ~ 27620091 (-)
G88154 NA non-coding upstream 563049 27627120 ~ 27631668 (-)
G88157 NA non-coding upstream 570833 27634904 ~ 27636720 (-)
G88190 NA non-coding upstream 1039259 28103330 ~ 28103666 (-)
AMCG00021723 hsf1 other downstream 134199 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 335535 26674078 ~ 26718508 (-)
G87871 NA other downstream 899668 26152105 ~ 26154375 (-)
AMCG00021700 NA other downstream 948652 26091227 ~ 26105391 (-)
G87806 NA other downstream 1146038 25905444 ~ 25908005 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other upstream 1717731 28781802 ~ 28783281 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other upstream 2005130 29069201 ~ 29071760 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 2666006 29730077 ~ 29742808 (-)
G88527 NA other upstream 3273512 30337583 ~ 30424612 (-)
AMCG00021820 NA other upstream 3813777 30877848 ~ 30888588 (-)

Expression


Co-expression Network