AMCG00021755


Basic Information

Item Value
gene id AMCG00021755
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 28215822 ~ 28218715 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021755
GCAGAATCTagtgaaaataaagaacaagtTGATGCCTTGGCTTAACTGTTGGTGTGACTTGAGGAAAAaaggaatataattaaaaatattaattatttgccAAGTATTGAatttaacatttacagaaaaatatgatGTAATGATGACATTCTTTATGTATCTATATGCTGCAAGCTATACAATTACTGATAGAAGCAGTTTACTGAAAAGGTTCAGCACCTGCAATTTCATCATCTCAGACCAGATCTCTGAGCTAACAGCATCTCTCAGGACACCAGCAGCTCAAGGGGCACCTGGCCGCCCTGGCTTAATGGGCCCACCAGGTCCTCCAGGGCCAGCTGGAAGTGCAGGACTGCCTGGATTAAGAGGTCCTATGGGCCCCAAAGGGCCCCATGGCTTCCATGGAGCACCTGGGCAGAAAGGAGAAGTTGGGGGAAAAGGAGAAAAGGGAGACATTGGAGTTGGGGTCCGTGGGGGTCAAGGACAGCCAGGCCCTGCAGGGGAGCCTGGGATTCCTGGCATTGGGAAAAATGGCCGGGATGGGGCTAGAGGCGAGCAAGGCAATCCGGGGGATCCGGGTATCCCTGGCTCTCGAGGCCCAAGAGGTCCTCCGGGGTTGTGCGATCCCTCAAACTGCATGGGACCTCCACCGATGTTCATGCCTGTGACCGGGAAGAAATCCTCCAGTATGAAAGGCCCATGAAgagaaattactttttcaaataagttaaaatagggaaatcaaaacaaaacacaccaatAAGCCGGGGTCATATCAAAGATACACTTGAAGAGACCTCAAGCGTCTTGTGTCTTCTGAAAACTAGTGAGGACACGTCAGCTTGCAGATCCTCGAGCTTTCAGATTTCAACTTTCAATGTTGCCTTATGTTTGTATGAATGAAGCTGCATGTTACCCACATACATGTTCATGTGTCCAAATCAATTATACATTCAAAGTTATTCAAAGAACAGTGAATACAGAGATTTTAGAGGGTTCAGATTTCTCATGACCATTTCAGAGCACCAGGGCTACAACTGATGAGCACATACAGAGCATTgacattcagttttatttgacctggaaaactgcaaacaagAATTGCTATTACTAAAAGCTACAATTTATTAAATATCCATAATGTGAATCTCTAATGAGAAACAGCCCTACGTTTGAAACCTCATACCATTGTATGTTGGACACTGACACTAGTGTAGCATGGGTGCAAATACATCACCCAATACACAAGACCATCATAACAATTCATTCACATAATtcctgaaagagaaaaataaatcttaagtAATGGTTCCATTGTATTCCTGTTTTGTTCATGCACTGTGCATGCTATTGTTTTAAGTATTACATTACAACAAATTCAATGGTTAATAAAGATTAAGCTTAATGGgtcttattcattatttaaaagggCATCAGTCTATCAATGGTTTCActtatttgtataataaatcaAGGTTTTCCATGATCTTCCCAAACTTAATGAAAGAAACTTCTATCCCTTGTTCTTTGCTATCAGCTATTAAACTGTGCATTGAAGTATGGAAAGGAATTtacaaacgtgtgtgtgtgtgtgtgtttcttaatgATTATTAATTGCTAATGAATCCAATGCAAATCGGGTGAGAGGAGAAGAAATTGTAACTCAAATGAGTGACAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021755 True 1680 mRNA 0.41 4 28215822 28218715

Neighbor

gene id symbol gene type direction distance location
AMCG00021747 NA coding downstream 574913 27638582 ~ 27640909 (-)
AMCG00021744 rplp1 coding downstream 628683 27584420 ~ 27587139 (-)
AMCG00021743 NA coding downstream 775560 27416270 ~ 27440262 (-)
AMCG00021738 cfap20 coding downstream 923826 27287252 ~ 27291996 (-)
AMCG00021735 LOC105904932,LOC108429636 coding downstream 954471 27236574 ~ 27261351 (-)
AMCG00021756 NA coding upstream 15925 28234640 ~ 28239140 (-)
AMCG00021757 khdrbs3,LOC106521499,LOC106531515 coding upstream 367461 28586176 ~ 28591802 (-)
AMCG00021767 NA coding upstream 824783 29043498 ~ 29047472 (-)
AMCG00021771 pqlc1 coding upstream 1043737 29262452 ~ 29264433 (-)
AMCG00021770 txnl4a,txnl4a.S,txn4a,LOC107593623,LOC106570226 coding upstream 1049699 29268414 ~ 29271589 (-)
G88191 NA non-coding downstream 82959 28132566 ~ 28132863 (-)
G88190 NA non-coding downstream 112156 28103330 ~ 28103666 (-)
G88157 NA non-coding downstream 579102 27634904 ~ 27636720 (-)
G88154 NA non-coding downstream 584154 27627120 ~ 27631668 (-)
G88153 NA non-coding downstream 595731 27619820 ~ 27620091 (-)
G88201 NA non-coding upstream 47997 28266712 ~ 28267553 (-)
G88226 NA non-coding upstream 479163 28697878 ~ 28698110 (-)
G88228 LOC107575789 non-coding upstream 542481 28761196 ~ 28761972 (-)
G88240 NA non-coding upstream 559578 28778293 ~ 28778685 (-)
G88241 NA non-coding upstream 560628 28779343 ~ 28779710 (-)
AMCG00021723 hsf1 other downstream 1295978 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 1497314 26674078 ~ 26718508 (-)
G87871 NA other downstream 2061447 26152105 ~ 26154375 (-)
AMCG00021700 NA other downstream 2110431 26091227 ~ 26105391 (-)
G87806 NA other downstream 2307817 25905444 ~ 25908005 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other upstream 563087 28781802 ~ 28783281 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other upstream 850486 29069201 ~ 29071760 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 1511362 29730077 ~ 29742808 (-)
G88527 NA other upstream 2118868 30337583 ~ 30424612 (-)
AMCG00021820 NA other upstream 2659133 30877848 ~ 30888588 (-)

Expression


Co-expression Network