AMCG00021767


Basic Information

Item Value
gene id AMCG00021767
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 29043498 ~ 29047472 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021767
ATGTCTGCTTGTCACCAGAGGGCTGCGGATAACATGGTCGAAGGAGCGATTCGGAACGGGGGATTGTACATCAAGCTAGGCCAGGATGCACTGTTCCAGGAAGACTTTAACTGCACTCctgacaaaatgtttaaatcgtTTGATTACGAGCCCGTGGCCGCTGCCAGCTTGGCGCAGGTGCACAAGGCGGAGCTCCAGGATGGCACACCTGTCGCTGTCAAGGTGCAGTACATTGACCTCAGAGATCGTTTTGACGGTGACATCCGGACACTCGAGATCCTCTTAGACATCGTGAAGTTCATTCACCCCAGCTTTGGATTCCGATGGGTCCTAAAGGATTTGAAAGGAACTCTGGCTCAGGAGCTGGATTTCGAGAATGAAGGCCGAAACTCGGAGCGCTGTGCCCAAGATCTCAAACACTTCAATTTCATTGTCATTCCCAAAGTATATTGGGACATGACCAGTAAGAGGGTGCTGACTGCTGATTACTGCGAAGGCTGCAAAATAAACAACGTGGAGGGAATCAAGAGCCAGGGGCTCAGTCTGAAAGATACAGCTGATAAACTGATTCGAACATTTGCAGAACAGATCTTTTACACTGGTTTTATTCATGCAGACCCCCACCCTGGCAATGtgctggTGAGAAGAGGCCCAGATAAGAAGGCAGAACTGGTCCTTTTGGACCATGGGCTGTATGACTTCctgagaaaaaaGGACCGCGTGGCTTTGTGTAAGCTGTGGCGGTCCATCATTCTCCGAGATGAGCCTGCGATGAAGAAGCACTCTGAGGACCTGGGAGTCAAAGACTACTTCCTGTTCTGCGAGATTCTGCTGCAACGGCCAATCAACATGCGGGAGATGGGGCTGGCCAACATCCTGACGCGGGAGGAGACGGCCTACATGCGGGAGATGGCCATGAACCACTTTGAGCGGATCATGGAGGTTCTGAAGTCGCTGCCGCGGCCCATGCTGCTGGTGTTCCGCAACATCAACACCGTGCGCAGCATCAACATCACGCTGGGGGCGCCAGTAGACAGATACTTTATCATGGCCAAGAGTGCTGTGAAGGGCTGGAGCCGCATACGAGCGTTCGACTCATCAAGACTACCAAAGATCGCCGTTTTCCGCTGGCTCTGGATGGTGTGGGAAAGCCTCAAATTTGAATTTGCTTTAAGGTCGGAAGTTGTGGCGATGCGTCTCACAGCCTCGTTACTGCGCCTGCTCGCTCATTTTGGCCTGGTACCTGCGGACGAGCAAATGTACCAGTACCTGCAACACTGA

Function

GO: NA

KEGG:

id description
K08869 ADCK, ABC1; aarF domain-containing kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021767 True 1281 mRNA 0.52 11 29043498 29047472

Neighbor

gene id symbol gene type direction distance location
AMCG00021757 khdrbs3,LOC106521499,LOC106531515 coding downstream 451696 28586176 ~ 28591802 (-)
AMCG00021756 NA coding downstream 804358 28234640 ~ 28239140 (-)
AMCG00021755 NA coding downstream 824783 28215822 ~ 28218715 (-)
AMCG00021747 NA coding downstream 1402589 27638582 ~ 27640909 (-)
AMCG00021744 rplp1 coding downstream 1456359 27584420 ~ 27587139 (-)
AMCG00021771 pqlc1 coding upstream 214980 29262452 ~ 29264433 (-)
AMCG00021770 txnl4a,txnl4a.S,txn4a,LOC107593623,LOC106570226 coding upstream 220942 29268414 ~ 29271589 (-)
AMCG00021774 NA coding upstream 225620 29273092 ~ 29275349 (-)
AMCG00021773 NA coding upstream 234084 29281556 ~ 29285963 (-)
AMCG00021775 NA coding upstream 260415 29307887 ~ 29315441 (-)
G88245 NA non-coding downstream 212274 28830158 ~ 28831224 (-)
G88244 NA non-coding downstream 231533 28811763 ~ 28811965 (-)
G88243 zfat,LOC107723386 non-coding downstream 257837 28785166 ~ 28785661 (-)
G88241 NA non-coding downstream 263788 28779343 ~ 28779710 (-)
G88240 NA non-coding downstream 264813 28778293 ~ 28778685 (-)
G88347 NA non-coding upstream 231889 29279361 ~ 29280873 (-)
G88434 NA non-coding upstream 791046 29838518 ~ 29841539 (-)
G88435 NA non-coding upstream 840973 29888445 ~ 29947540 (-)
G88545 NA non-coding upstream 1377832 30425304 ~ 30425552 (-)
G88562 NA non-coding upstream 1478274 30525746 ~ 30562800 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 260217 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 2123654 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 2324990 26674078 ~ 26718508 (-)
G87871 NA other downstream 2889123 26152105 ~ 26154375 (-)
AMCG00021700 NA other downstream 2938107 26091227 ~ 26105391 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other upstream 21729 29069201 ~ 29071760 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 682605 29730077 ~ 29742808 (-)
G88527 NA other upstream 1290111 30337583 ~ 30424612 (-)
AMCG00021820 NA other upstream 1830376 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 2082111 31129583 ~ 31132185 (-)

Expression


Co-expression Network