AMCG00021771 (pqlc1)


Basic Information

Item Value
gene id AMCG00021771
gene name pqlc1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 29262452 ~ 29264433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021771
ATGGAAGATGAGGTCTTCGACCAGCTCGTCTATGTGCTCAACCAGCTCGTTTCTTGGGTGGCTGCTGGTGCCATGATTTTCGGAGGGGTGGTGCCCTACATCCCGCAGTACCGGGACATCCGACGGACCCAAAACGCGGAGGGATTTTCCACCTATGTGTGCCTGGTCCTACTGGTGGCTAACATCCTCAGGATACTCTTCAGGTTTGGGAGGTATTTTGAGACCCCTCTGTTGTGGCAAAGCATCATCATGATCATGACCATGCTGATAATGCTCAGTGTCTGTACGGATGTCCGGGTGGCCACGGAACTCAGCACCAAGCGGCGCTCCTTCATC

Function

symbol description
pqlc1 solute carrier family 66, member 2

NR:

description
PREDICTED: PQ-loop repeat-containing protein 1 isoform X2

GO: NA

KEGG:

id description
K23679 PQLC1, SLC66A2; solute carrier family 66, member 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021771 True 336 mRNA 0.54 2 29262452 29264433

Neighbor

gene id symbol gene type direction distance location
AMCG00021767 NA coding downstream 214980 29043498 ~ 29047472 (-)
AMCG00021757 khdrbs3,LOC106521499,LOC106531515 coding downstream 670650 28586176 ~ 28591802 (-)
AMCG00021756 NA coding downstream 1023312 28234640 ~ 28239140 (-)
AMCG00021755 NA coding downstream 1043737 28215822 ~ 28218715 (-)
AMCG00021747 NA coding downstream 1621543 27638582 ~ 27640909 (-)
AMCG00021770 txnl4a,txnl4a.S,txn4a,LOC107593623,LOC106570226 coding upstream 3981 29268414 ~ 29271589 (-)
AMCG00021774 NA coding upstream 8659 29273092 ~ 29275349 (-)
AMCG00021773 NA coding upstream 17123 29281556 ~ 29285963 (-)
AMCG00021775 NA coding upstream 43454 29307887 ~ 29315441 (-)
AMCG00021776 NA coding upstream 53890 29318323 ~ 29321631 (-)
G88245 NA non-coding downstream 431228 28830158 ~ 28831224 (-)
G88244 NA non-coding downstream 450487 28811763 ~ 28811965 (-)
G88243 zfat,LOC107723386 non-coding downstream 476791 28785166 ~ 28785661 (-)
G88241 NA non-coding downstream 482742 28779343 ~ 28779710 (-)
G88240 NA non-coding downstream 483767 28778293 ~ 28778685 (-)
G88347 NA non-coding upstream 14928 29279361 ~ 29280873 (-)
G88434 NA non-coding upstream 574085 29838518 ~ 29841539 (-)
G88435 NA non-coding upstream 624012 29888445 ~ 29947540 (-)
G88545 NA non-coding upstream 1160871 30425304 ~ 30425552 (-)
G88562 NA non-coding upstream 1261313 30525746 ~ 30562800 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 190692 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 479171 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 2342608 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 2543944 26674078 ~ 26718508 (-)
G87871 NA other downstream 3108077 26152105 ~ 26154375 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 465644 29730077 ~ 29742808 (-)
G88527 NA other upstream 1073150 30337583 ~ 30424612 (-)
AMCG00021820 NA other upstream 1613415 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 1865150 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 2798952 32063385 ~ 32069464 (-)

Expression


Co-expression Network