AMCG00021773


Basic Information

Item Value
gene id AMCG00021773
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 29281556 ~ 29285963 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021773
GTTGGAGACAATGTATCAGCTTCCTGTACTtaatctggaaaaaataagaaaatctaGAAAGCgggtaaaaaatattttgttggaCATTGGCCTTCAGGATTGTAAAGACCTTCTGGGGGAACTCCAAAGCTTTGATGCTGGTGATAAGTATTTCAATAATACAGAATGGACGGATCTTTCAGAAGCTGACCACAATGGCAGAAGGAAGAAAAAGCCAAGATACCGGACCAACTTGTTCTGCTGCAGCCTGTGCAAGTTTTCTGCAAGGACCCTTTACTCCTACAGGGGCCATGTGCAGCGCTGCCATGAAGAGGAGCAGGACCTGGAAGCTTTGTCCGGCTGCCCTGCCTGCCCATTCGTCGCCCACCCTAAGGTCATCAACCAGCACTTCAAGATCTTCCACAGCATGCAAAGGAAGAACTTGGCTGCCTCCCAGCAACTTGCAACGGAAGCTGCTCCCATCTCATCAGAGAGGTTCTCGTGTCGACAATGCCCCTACCAGGACTCACTGTATTACtgcatgaaaaaacacattttactgagTCACTACACATCCTTTCTGAATCGTTATTTTGGCCAACGGACTGAAAGCGAAATGAGGAACGGCGGCCCACACACCCTAAAATTTTACTGCAAAATGTGCAGCTTACCAGCTGACAGCTCAGAGCATCTACTCTATCACATCCTGACCTCAGACAAGCACAAGGAACTGGAGATCAATTTAAAAGCCTTAATGTATGAACAATCAAAGTATGGTAAACGCTTCCATCAGCAGAGGCTCCTTGCACCGAAGGCCAAAGTCCAACAACATATTGTAAAATTACCCTTGGTGCCTGGGACCAGTGATAAGCAAGTGCCCCAGTACATGCAGAATCTCCCTCAGGGGTTGGCAGGACCATCTCCTGAGGGAAGTTCAACAACTTCCCTTTCAAGCACGGTGGTTCCTGCAGTTCGTGGTGCAGTGGGATCTGTGCCAGTGGTTCATGGATCTCCAAACGGCACCGGAACTCTGGTCTGCACTGCTGGGAGCAGCCATGCTTATCTCCCGCCGCCAGCCTCCGCTCTTGTGCAGCTGGCCAGCGCAGAGGCGAAGGGCTTACTGCCACCCGGCTCAGCAGTCGCAACTCTACAGAACTCTCAGCCTCCCAGAGGAGTATCGGCCAGCATGCCGCCTCGAGGCAGTGCTGCAGCATCTGTGTTGCAGGCTACTGTCGGGGGTTTACGGAAGGGGCCTGTGAGTACGACACTGGCAAGCATTACAGACACTGCTTCCAAACAACTGCCAGTTTCTGTCGGTGTCccagtgcagcagcagcagcagcagcagcagcagcagcagcagcagcagcgtctGACTCTCCTACCATCTGGTCTTCCGTCTGGTGGCACCCAAACCCTCAATACAGCATCTGTACCAGTGACTCAGCCTAGTGCAGCTTTACAGTCGCAGCCAATTAAGCCCCCTGCCCAGCCGGCACTGAACTCTGCATCCAAGGAAGCCAAGAAGTGGATAACATGTCCTGTTTGTAATGAGCTCTTTCCCTCTAATGTGTACCAAGTACACATAGAGGTGGCTCATAAGCAGCCTTCTACCAAGCGCAGCAGTACGCCAAAAGGAATAGCTGTCCGTGCACCATTTCTGAGGAGGGTGAAAGACAAATCCATCCGATGCCTGCTCTGTAACATCCAGCTTTCAGCAAATGGTTTTTTTGAGCACTTGTTGCATGGACTTAACTGCTTATACTGTCCAGCAATGTTCTACTCCATCAAACAACTCATAGATCATACCAATGTGGAGCACAGTCCCTCACAGACTGCGAACTGTGAATTCCTGAAAAATGAATACCGACTTTATTCCAGTGACCAAGGGGAGCTCTTGTTCCCCTACTTTGACATTACCACATCTGCGCCTAAAGAGATGTTAGGAAACAAGTTAAGTGAGTTAAATCTGGCCCTGGTGACTGGCACTCTTGACCTGATTTACATCAAGATGTTTCCAGTGCCCAAACGGGGAATCTGCCAGATCCCTTTAAAAAATCACTGCACTGACTGTCCCTTTTGCCCAGAAAAGCTACAGAGCGTAGATGATTATGAACTGCATTTAAAGGTAAAGCACCACATCATGCCCACAATCCATGCAATTCTGAAGACTCCTGCTTTCAAGTGCATATACTGTTGTGGTGTGTACACTGGCAAAACCACACCCAAAGCCATCTCTGTTCATGTGCAGCGCTGCAGGTGTGCTCCCAAGACTGCCAAAGACCTGGAGAGAATGATGAACCCTGACTCCAGCGTTCAGACAATGATTACAATGAATGGAGGTCTCCAGAAGGTAGTCCTTTACTCCATGGAACAAGAAACCACAAAGCAGGTGCCGTCCAGCTCCCAGGAAGACAACCCACAGCTTCAGAGTAAACTGAGGCTGGAACTGGCTGTGAGGGAAGCGGTGGAAGCAaacaagagggagagggaagccTTGGCAGCGAAACGGCGGAAGATTGACACTGTAGAAAGCACCCCAAAAGTGGCTCCCCAAAGCGAGCCTGCTTTCCCATTGGTTCTGGATCCTGCAGGCCTCGAAATGCGTTCTTTTGAGGAACGAAAGGATTTCCTCACCAAATATTTCAACAAAAAGCCCTACCTATCCAAGAAAGAAGCCGAAACACTAGCGTCTCGCCTGTGGTTCAATAAGACTGACGTAGCCTGCCACTTTGGCTCCAGGCGTTCTAGATGTATGAAAGCCCTCCAAAAGAATAAGGCAGCAGTCTTATTAGGATTTAATATGGCTGCGCTTAAGAAGGTGAAACATGACCTTGTCATTGCAGCACAAGTTGCAGAAGAATCTGTGGTTCAGAAGGCTtctcaaaaaaatgaaaaaaagacatCC

Function

GO: NA

KEGG:

id description
K24878 ADNP2; activity-dependent neuroprotector homeobox protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021773 True 2887 mRNA 0.49 4 29281556 29285963

Neighbor

gene id symbol gene type direction distance location
AMCG00021774 NA coding downstream 6207 29273092 ~ 29275349 (-)
AMCG00021770 txnl4a,txnl4a.S,txn4a,LOC107593623,LOC106570226 coding downstream 9967 29268414 ~ 29271589 (-)
AMCG00021771 pqlc1 coding downstream 17123 29262452 ~ 29264433 (-)
AMCG00021767 NA coding downstream 234084 29043498 ~ 29047472 (-)
AMCG00021757 khdrbs3,LOC106521499,LOC106531515 coding downstream 689754 28586176 ~ 28591802 (-)
AMCG00021775 NA coding upstream 21924 29307887 ~ 29315441 (-)
AMCG00021776 NA coding upstream 32360 29318323 ~ 29321631 (-)
AMCG00021777 pard6g,pard6gb,LOC107731577,LOC105910269,LOC106570232,LOC106588584 coding upstream 42035 29327998 ~ 29332145 (-)
AMCG00021778 pard6g coding upstream 79933 29365896 ~ 29374669 (-)
AMCG00021780 NA coding upstream 100864 29386827 ~ 29402705 (-)
G88347 NA non-coding downstream 683 29279361 ~ 29280873 (-)
G88245 NA non-coding downstream 450332 28830158 ~ 28831224 (-)
G88244 NA non-coding downstream 469591 28811763 ~ 28811965 (-)
G88243 zfat,LOC107723386 non-coding downstream 495895 28785166 ~ 28785661 (-)
G88241 NA non-coding downstream 501846 28779343 ~ 28779710 (-)
G88434 NA non-coding upstream 552555 29838518 ~ 29841539 (-)
G88435 NA non-coding upstream 602482 29888445 ~ 29947540 (-)
G88545 NA non-coding upstream 1139341 30425304 ~ 30425552 (-)
G88562 NA non-coding upstream 1239783 30525746 ~ 30562800 (-)
G88643 NA non-coding upstream 1675740 30961703 ~ 30962096 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 209796 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 498275 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 2361712 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 2563048 26674078 ~ 26718508 (-)
G87871 NA other downstream 3127181 26152105 ~ 26154375 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 444114 29730077 ~ 29742808 (-)
G88527 NA other upstream 1051620 30337583 ~ 30424612 (-)
AMCG00021820 NA other upstream 1591885 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 1843620 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 2777422 32063385 ~ 32069464 (-)

Expression


Co-expression Network