AMCG00021774


Basic Information

Item Value
gene id AMCG00021774
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 29273092 ~ 29275349 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021774
ATTTACAAACCAGCTGGCTCTGGCGGTGCCTTGAACCTCACAGCCCGCTGCAAACCTAAGAGGGAGGACAGTATGCGCATACAGATCCTGAACTCCCTTCTGTTCAAGGCTATCAGTGACCTGCTACACTCTAGTGATGTGAGCTCTGAAATCTGTCTCCTAAATGTTGAAATTTCTAAGGTCTCTCTGCCCTTGGATTTCTCCTGCTGCCGAGTTTATTGGAAAACAAGTGGGACTTCAGAGAAAGATGACCTAATTCAGCAAGGCTTGAACAAGTGTGCCCCTCGCATTCGGTACCTCCTTATCGCAGACCAAATCCTTGGCAGTGTTCCACCCGTGACATTCATTAAAGATAAGGAATATGCAGCAGTATCAGAGATTGAAAGACTCTTAAAGATTGCAGACTTTGGACCAGGAGAGAACACAGAGGAATTGGAGCAAAGCTTGAAAGATAGAGGGGATTCTGTGCGTGTGGCGGCCGCTTCAGAGCAGCCCACTACTTCAACAGCCCCGGGCTTGTTTGGCATTGACCATGAAGCACTGAACAGACAGATCCTGGAGTACAAGAGGAGGACAAAAGAAGCGCTCGTTGAGTCTTCTCAGTTCAGCCTCACTGAGCAGCAACAGGAACTTCTAGCGGAGCTGAGGAAGCAGAAGATCataaacaagaagaagaagaaaaaatccaAGCGTGATATTGACATTGATATTACCCCTCAGGCATATCTCCTGGAGAAATACAGTCAGGAGCACAGTACTGAAGAACTGGAGGGTCCTGAATATAGCACTGAGGACTCTGAGATCAAGGAACTGATTTCAGAAGAGGACCAAAAGAACAGATTTGTATAA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021774 True 849 mRNA 0.47 5 29273092 29275349

Neighbor

gene id symbol gene type direction distance location
AMCG00021770 txnl4a,txnl4a.S,txn4a,LOC107593623,LOC106570226 coding downstream 1503 29268414 ~ 29271589 (-)
AMCG00021771 pqlc1 coding downstream 8659 29262452 ~ 29264433 (-)
AMCG00021767 NA coding downstream 225620 29043498 ~ 29047472 (-)
AMCG00021757 khdrbs3,LOC106521499,LOC106531515 coding downstream 681290 28586176 ~ 28591802 (-)
AMCG00021756 NA coding downstream 1033952 28234640 ~ 28239140 (-)
AMCG00021773 NA coding upstream 6207 29281556 ~ 29285963 (-)
AMCG00021775 NA coding upstream 32538 29307887 ~ 29315441 (-)
AMCG00021776 NA coding upstream 42974 29318323 ~ 29321631 (-)
AMCG00021777 pard6g,pard6gb,LOC107731577,LOC105910269,LOC106570232,LOC106588584 coding upstream 52649 29327998 ~ 29332145 (-)
AMCG00021778 pard6g coding upstream 90547 29365896 ~ 29374669 (-)
G88245 NA non-coding downstream 441868 28830158 ~ 28831224 (-)
G88244 NA non-coding downstream 461127 28811763 ~ 28811965 (-)
G88243 zfat,LOC107723386 non-coding downstream 487431 28785166 ~ 28785661 (-)
G88241 NA non-coding downstream 493382 28779343 ~ 28779710 (-)
G88240 NA non-coding downstream 494407 28778293 ~ 28778685 (-)
G88347 NA non-coding upstream 4012 29279361 ~ 29280873 (-)
G88434 NA non-coding upstream 563169 29838518 ~ 29841539 (-)
G88435 NA non-coding upstream 613096 29888445 ~ 29947540 (-)
G88545 NA non-coding upstream 1149955 30425304 ~ 30425552 (-)
G88562 NA non-coding upstream 1250397 30525746 ~ 30562800 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 201332 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 489811 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 2353248 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 2554584 26674078 ~ 26718508 (-)
G87871 NA other downstream 3118717 26152105 ~ 26154375 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other upstream 454728 29730077 ~ 29742808 (-)
G88527 NA other upstream 1062234 30337583 ~ 30424612 (-)
AMCG00021820 NA other upstream 1602499 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 1854234 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 2788036 32063385 ~ 32069464 (-)

Expression


Co-expression Network