AMCG00021791 (znf704,LOC107696217,LOC107555575,LOC107702114,LOC107584255)


Basic Information

Item Value
gene id AMCG00021791
gene name znf704,LOC107696217,LOC107555575,LOC107702114,LOC107584255
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30119020 ~ 30126407 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021791
GAAGGCCGCAGAGGAAGCAGACATGGACAAAGTGACCGCGGCCATGGTTCTGACCAGCTTGTCCACCAGTCCGCTCGTCCGCAGCCCTCCAGTCAAAGTGGGGGAAGGTGCCAACGGCTCCTGGAAAGAAGGGGGATTCACACCCTCCAGTTACAGCAGCAGTGGCTACTGGAGTTGGAGCGCTCCTAGTGACCAGTCCAACCCCTCCACCCCATCGCCGCCCCTCTCTGCTGACAACTTCAAGCCGTTCCGCGTCCCCAGTGTCCCCAGCCAGCCGGACGATGGCATCGACGAGGCCGATGCCAGCAGCCTCCTCTTTGATGAGCCAATTCCTCGGAAAAGGAAGAACTCCATGAAAGTGATGTTCAAGTGCTTGTGGAAGAACTGTGGGAAGGTCCTGAGCACAGCAGCTGGAATCCAGAAACACATTCGCACTGTACACCTGGGGCGAAACTGTGACTCTGAGTGCAGCGACGGCGAGGAGGACTTCTACTACACCGAGATCAAGCTCAACACAGACTCCGTGGCCGAGGGGCTGAGCAGCCTGTCGCCGGTCTCGCCCTCCATGCTGTCACCCCCGCCCGGCCTCCCCAGCGCGCCCGACCCCGGCCGGCAGGACAATGGCCACGTGAAGGGCGACGGCAAGCTCACCACCCCCCTCAGCCGATCCGCTCCCAGCACCCTCTACCTCGTGCACACAGACCACGCCTACCAGGCAACAGCACCTGTTAACATTCCTAGCTCGACCAACTTCACTccgagcagcagcagcagtttcaGTATTTCCTGGCAATCTCCACCAGTTACCTTTACAGGCATCTCGGTCAGTTTCCAGCCTCTGTTGGCCCTGGCAccgGCCTCCCCAACACACAGCCGGACACAGGGCTTTGGAGAACAGCGTCCACTGGCCAACAATGTGCTGTCCTCCCCTCCTAGGGCTGCTGTCGGTCTCAGGAAATCTCGCGGAGAGGGGAAAAAGTGCCGCAAGGTTTACGGGATGGAGAACAGGGACATGTGGTGCACGGCCTGCCGCTGGAAGAAAGCCTGCCAGAGGTTCGTTGAC

Function

symbol description
znf704 Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. Orthologous to human ZNF704 (zinc finger protein 704).

NR:

description
PREDICTED: zinc finger protein 704-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021791 True 1063 mRNA 0.60 7 30119020 30126407

Neighbor

gene id symbol gene type direction distance location
AMCG00021792 NA coding upstream 15890 30093869 ~ 30103130 (+)
AMCG00021790 NA coding upstream 27530 30077372 ~ 30091490 (+)
AMCG00021785 gmpr,LOC108425204,LOC108257268,LOC103024228 coding upstream 288623 29815490 ~ 29830397 (+)
AMCG00021784 LOC107677448,LOC106606150 coding upstream 314273 29788734 ~ 29804747 (+)
AMCG00021782 NA coding upstream 336450 29753411 ~ 29782570 (+)
AMCG00021794 NA coding downstream 58913 30185320 ~ 30200518 (+)
AMCG00021795 hey1,LOC104947062,LOC107584259,LOC102780967 coding downstream 123676 30250083 ~ 30254353 (+)
AMCG00021799 si:dkeyp-120h9.1,LOC106570559,LOC105012503 coding downstream 164834 30291241 ~ 30299913 (+)
AMCG00021800 NA coding downstream 221417 30347824 ~ 30375199 (+)
AMCG00021798 NA coding downstream 253340 30379747 ~ 30381378 (+)
G88450 NA non-coding upstream 70132 30047128 ~ 30048888 (+)
G88440 NA non-coding upstream 140461 29975041 ~ 29978559 (+)
G88403 NA non-coding upstream 393058 29725159 ~ 29725962 (+)
G88352 NA non-coding upstream 730419 29376521 ~ 29388601 (+)
G88308 NA non-coding upstream 803461 29307879 ~ 29315559 (+)
G88454 NA non-coding downstream 11131 30137538 ~ 30139284 (+)
G88452 NA non-coding downstream 15788 30142195 ~ 30219496 (+)
G88485 NA non-coding downstream 129617 30256024 ~ 30258197 (+)
G88609 NA non-coding downstream 600877 30727284 ~ 30730868 (+)
G88655 NA non-coding downstream 921396 31047803 ~ 31048529 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 733695 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 843673 29264827 ~ 29275347 (+)
G88276 NA other upstream 1053681 29060887 ~ 29065339 (+)
G88238 NA other upstream 1340287 28778315 ~ 28778733 (+)
AMCG00021745 NA other upstream 2481936 27632915 ~ 27637084 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other downstream 140995 30267402 ~ 30407772 (+)
AMCG00021802 kdm1b other downstream 323550 30449957 ~ 30468920 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 4800146 34926553 ~ 35077090 (+)
G89142 NA other downstream 5084726 35211133 ~ 35263537 (+)
G89299 NA other downstream 5838164 35964571 ~ 35967384 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014899 znf704 coding NC_007130.7 CM002903.2 31956534 ~ 32042105 (-)
grasscarp (Ctenopharyngodon idella) CI01000054_07454627_07503082 ZNF704 coding CI01000054 null 7454627 ~ 7503082 (+)