AMCG00021798


Basic Information

Item Value
gene id AMCG00021798
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30379747 ~ 30381378 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021798
ATGTTCCAGTGCATAATAAGGTTTTACGAGACATACATAAAGTCATGTTTGTTTCCAAGAGAACAGGAGTCAGAGCCAGTGAAAAAAGACATTCTCATTCACAAAATCATACTGGCTGGCAAAAACATTCGCAACACCAGCCTCTCCCTGGATAAGAGGATACAAGCAGCCTCTGATATTGGAGTCCTGGCTTACACAGGAGGCCGGGTGGCTGCGATGTATGCAGGGGAGTACATGCCCTACCTTGCAGCATTCCTGACAAGGCCTGACCTCTCTACCTCAGCCACCATAACAATCCTGAAGACCCTCAGTGGCATCAGCTACACCCACCATAAAAACCAGCAAAAGGCAATGGACCTGAATCTCTGTGACATGCTTTTAGGCTTCCTACACCAAGAGGAAGACCCTCTTCTGACAGACAGCCCGAAGTCCATTCTAGTGAAGTTCTGGACCTGCTACCTACTGAGTGTGCTTTGCTGGAATAACATCCCCCAGATCAGATTGCTGAGCAACTCACAGAGCCTGAGGAGGGACCTGGAAATTCTGAGGAAGAAAAGATGGGATGACTGGCCTAACAACTATGCCCAGGAACTTGTGGATCTCTTGGGTTTTTCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021798 True 618 mRNA 0.48 2 30379747 30381378

Neighbor

gene id symbol gene type direction distance location
AMCG00021800 NA coding upstream 4548 30347824 ~ 30375199 (+)
AMCG00021799 si:dkeyp-120h9.1,LOC106570559,LOC105012503 coding upstream 79834 30291241 ~ 30299913 (+)
AMCG00021795 hey1,LOC104947062,LOC107584259,LOC102780967 coding upstream 125394 30250083 ~ 30254353 (+)
AMCG00021794 NA coding upstream 179229 30185320 ~ 30200518 (+)
AMCG00021791 znf704,LOC107696217,LOC107555575,LOC107702114,LOC107584255 coding upstream 253340 30119020 ~ 30126407 (+)
AMCG00021804 NA coding downstream 27238 30408616 ~ 30432115 (+)
AMCG00021810 kcnv1 coding downstream 101198 30482576 ~ 30492325 (+)
AMCG00021812 dpy19l4 coding downstream 145654 30527032 ~ 30561697 (+)
AMCG00021813 NA coding downstream 187824 30569202 ~ 30573271 (+)
AMCG00021811 NA coding downstream 236541 30617919 ~ 30678407 (+)
G88485 NA non-coding upstream 121550 30256024 ~ 30258197 (+)
G88452 NA non-coding upstream 160251 30142195 ~ 30219496 (+)
G88454 NA non-coding upstream 240463 30137538 ~ 30139284 (+)
G88450 NA non-coding upstream 330859 30047128 ~ 30048888 (+)
G88440 NA non-coding upstream 401188 29975041 ~ 29978559 (+)
G88609 NA non-coding downstream 345906 30727284 ~ 30730868 (+)
G88655 NA non-coding downstream 666425 31047803 ~ 31048529 (+)
G88666 NA non-coding downstream 748969 31130347 ~ 31132235 (+)
G88677 LOC101154678 non-coding downstream 832931 31214309 ~ 31214669 (+)
G88741 NA non-coding downstream 1477457 31858835 ~ 31859037 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 994422 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 1104400 29264827 ~ 29275347 (+)
G88276 NA other upstream 1314408 29060887 ~ 29065339 (+)
G88238 NA other upstream 1601014 28778315 ~ 28778733 (+)
AMCG00021745 NA other upstream 2742663 27632915 ~ 27637084 (+)
AMCG00021802 kdm1b other downstream 68579 30449957 ~ 30468920 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 4545175 34926553 ~ 35077090 (+)
G89142 NA other downstream 4829755 35211133 ~ 35263537 (+)
G89299 NA other downstream 5583193 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 6268854 36650232 ~ 36659244 (+)

Expression


Co-expression Network