AMCG00021805 (acot13,LOC102778390)


Basic Information

Item Value
gene id AMCG00021805
gene name acot13,LOC102778390
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30394379 ~ 30395918 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021805
attaagtaattgagagctcagctggaacaaaaaccagcagggtaggggctacTCCAGGTCCAGGGTTGGGAGCCACTGGTCTAATCACTGCGGCTTGTGTTGGGTCAATGTCCTGGATGCAGGTGAGCCTGGTGTCGGCCAGCCCAGGCAGGGTGGTGTGTGAGCTGCGAGTGGAGGAGGAGCACACCAACCGCGGCGGCACTCTGCACGGAGGCATGACGGCCACACTGGTGGACGTGGTGTCCACAGTCGCGTTACTGCACACGGAGCGGCAAGCGCCAGGGGTCAGCGTGGACATGAACATCACATACATGAATGCAGCAAAACTGGGAGATGATGTCCTTATCACTGCTCAAGTTCTGAAGCAAGGGAGGACCTTGGCGTTTGCTACAGTAGACATCACTAACAAAGCAACGGGAAAACTCATTGCTCAGGGAAGACACACTAAACATCTTGGCAGCTAAAGGCAACATGGAACATCTGGTTATCACTTAGCTATTAAAAACTGTGCCATATAGTCTGCATAGTGCCTGCTTCAAGTGCCACTGGAGACCAAAGTTTTTGTGGCATCCAAGCACATTAAACAAACTCCTTAAACTGTTGGGACACTCACTCTGTGGACTACTTGTCTGTTGTAAATACTTGCTATTAtctcaaacataaaataaacatagtaTACACAGTAAGAGTTTGAGACCATTCTATTAGACAACTTTTATAACTTGAATTACTTAGATTATGAAAAGATGTTTATATATGGtgaatgatttttttcttttctagtcTGCCCTCCCTTTTAAGTTCATAATCTATTGATTATGCTCAACAGTACAACGCTCAGACTAGTTCTTACAGCATTTATTCTTTGAGGTTAGCACATCAGATCAAGTGTAGGGGATGGGAAAATTTTAAAAGATCTGAATTTTGAGGTTTATGGCCAAATGAAAGTCCACAAATTGTGATCTGTATTTATCCAAAAGAAGTTCCAAAGGCAGTAACCCAGAAATGAGCTATACAACTATGATGCTAGCCAGACCAGGGGAATTACTTGTGCAATATGACATTTCTCTCTGTAAATCTCATAATTGTCCCTAATCCATATGCATTTTTGCTCCAAAATAATCTGCCTGGTTAATATCCACCTGAactgtatatcaaataaatt

Function

symbol description
acot13 Enables palmitoyl-CoA hydrolase activity. Orthologous to human ACOT13 (acyl-CoA thioesterase 13).

NR:

description
acyl-coenzyme A thioesterase 13

GO: NA

KEGG:

id description
K17362 ACOT13; acyl-coenzyme A thioesterase 13

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021805 True 1165 mRNA 0.43 2 30394379 30395918

Neighbor

gene id symbol gene type direction distance location
AMCG00021801 LOC107743838 coding downstream 7562 30381960 ~ 30386817 (-)
AMCG00021797 LOC106570559,LOC105012503,LOC102295214 coding downstream 109243 30284672 ~ 30285136 (-)
AMCG00021796 LOC105009370,LOC106588819,LOC100696657,LOC107596629,LOC102210154,LOC107685565 coding downstream 128925 30256031 ~ 30265454 (-)
AMCG00021793 NA coding downstream 235672 30142222 ~ 30158707 (-)
AMCG00021788 NA coding downstream 345508 30047330 ~ 30048871 (-)
AMCG00021808 NA coding upstream 30198 30426116 ~ 30428501 (-)
AMCG00021807 NA coding upstream 38009 30433927 ~ 30444924 (-)
AMCG00021806 NA coding upstream 66093 30462011 ~ 30469642 (-)
AMCG00021809 NA coding upstream 123083 30519001 ~ 30519513 (-)
AMCG00021817 NA coding upstream 303431 30699349 ~ 30707723 (-)
G88435 NA non-coding downstream 446839 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 552840 29838518 ~ 29841539 (-)
G88347 NA non-coding downstream 1113506 29279361 ~ 29280873 (-)
G88245 NA non-coding downstream 1563155 28830158 ~ 28831224 (-)
G88244 NA non-coding downstream 1582414 28811763 ~ 28811965 (-)
G88545 NA non-coding upstream 29386 30425304 ~ 30425552 (-)
G88562 NA non-coding upstream 129828 30525746 ~ 30562800 (-)
G88643 NA non-coding upstream 565785 30961703 ~ 30962096 (-)
G88736 NA non-coding upstream 1402834 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 1463491 31859409 ~ 31859833 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 651571 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 1322619 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 1611098 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 3474535 26899963 ~ 26919844 (-)
AMCG00021719 ndrg1a other downstream 3675871 26674078 ~ 26718508 (-)
AMCG00021820 NA other upstream 481930 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 733665 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 1667467 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3864086 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3951070 34346988 ~ 34380295 (-)

Expression


Co-expression Network