AMCG00021809


Basic Information

Item Value
gene id AMCG00021809
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30519001 ~ 30519513 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021809
atgccgtGTCGAAAGGAGAACTACATCCTCCTGGAGCAGAGCGTCACGGTGGACTCGAAAGAGGTCGACGCTCTGGTCACCAAGATCGGCGAAGCCCTGCAGCTGCACAACAATACTACGGGTGCGCATCAGAAGACGGCGTCCTGCCTTCAtcacagtaacaacaacaacaacacccgCCTCGGCAGCGCCAAGCAGCCGggcaaccacaaccacaaccgCGGCTCGGCGCTGTACCGGCGGGCCGGCTGCTGCATTCGGCTCCGGAATCGCAGCGTCCGGAGCCGGGCCAGCCCCTACTGCGTCCCGGGGGAGAGCGACCAAGAATGGGACAGTTTGAGAGCCtggaacagaaagaaaatcGACGTGTCCAGCCAGCAGGACGACCCCCACCAGCTGCTCCAGGAGTTGATTTTGTCGGGGAATCTGATCAAGGAGGCGGTCAGGCGGCTGCAGCTCTCCGCGGCGGAGCGTGTGGATCATCCCAAATCCGCCGACAATCTGCAGTGCTGA

Function

GO: NA

KEGG:

id description
K03096 FRAT2; frequently rearranged in advanced T-cell lymphomas 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021809 True 513 mRNA 0.62 1 30519001 30519513

Neighbor

gene id symbol gene type direction distance location
AMCG00021806 NA coding downstream 49359 30462011 ~ 30469642 (-)
AMCG00021807 NA coding downstream 74077 30433927 ~ 30444924 (-)
AMCG00021808 NA coding downstream 90500 30426116 ~ 30428501 (-)
AMCG00021805 acot13,LOC102778390 coding downstream 123083 30394379 ~ 30395918 (-)
AMCG00021801 LOC107743838 coding downstream 132184 30381960 ~ 30386817 (-)
AMCG00021817 NA coding upstream 179836 30699349 ~ 30707723 (-)
AMCG00021816 NA coding upstream 189312 30708825 ~ 30719230 (-)
AMCG00021818 NA coding upstream 211142 30730655 ~ 30741775 (-)
AMCG00021819 NA coding upstream 248221 30767734 ~ 30768744 (-)
AMCG00021823 gdf6a coding upstream 481473 31000986 ~ 31028447 (-)
G88545 NA non-coding downstream 93449 30425304 ~ 30425552 (-)
G88435 NA non-coding downstream 571461 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 677462 29838518 ~ 29841539 (-)
G88347 NA non-coding downstream 1238128 29279361 ~ 29280873 (-)
G88245 NA non-coding downstream 1687777 28830158 ~ 28831224 (-)
G88562 NA non-coding upstream 6233 30525746 ~ 30562800 (-)
G88643 NA non-coding upstream 442190 30961703 ~ 30962096 (-)
G88736 NA non-coding upstream 1279239 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 1339896 31859409 ~ 31859833 (-)
G88762 NA non-coding upstream 1469261 31988774 ~ 31989050 (-)
G88527 NA other downstream 94389 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 776193 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 1447241 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 1735720 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 3599157 26899963 ~ 26919844 (-)
AMCG00021820 NA other upstream 358335 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 610070 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 1543872 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3740491 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3827475 34346988 ~ 34380295 (-)

Expression


Co-expression Network