AMCG00021817


Basic Information

Item Value
gene id AMCG00021817
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30699349 ~ 30707723 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021817
GACTTGGCGCCGGCGCCAGCTGATGCATTCACTTCACTTTTCTGAAACCAGCTCATCTACGAGGATGTCCAGGCGCAGGACTGCCACAAAAGGAAACCTGGAGTAGCAGCCACCATAAAACAAAGCTATGAGATCCAGAACCGCTGGGCACCCGGAGGAGGCAGCCCATGCATCCTCATCGAAACCCCCCACAAAGAAATGGAGGCCACTACGGATCTGTCTGGTTTCAAGCAGTTTAGATTCAAAAATCTTTTCATAAAGCCCTCGCCTTTGCCATGCCTCAGCTGGGGCAGTTCGGAGGACGTCTGGATTAAGATGCTAAATAAGGAGCTGAAGTACGTCCACGACAAGAGCTTCCTCACCCAGCACCCAAAGCTACAGCCAAAGATGAGAGCAATCCTGCTGGACTGGCTTTTGGAGGTAAGCGAGGTGTACACTCTCCACCGAGAAACCTTCTACCTGGCCCAAGATTTCTTTGACCGCTTCATGTCGACACAGGAGAATATCAACAAGAACAGGCTGCAGCTCATCGGCATTACCTCGCTCTTCATCGCCTCCAAAATAGAGGAAATCTACCCTCCCAAGCTGCATGAGTTTGCATATGTCACAGATGGTGCCTGTTCAGAAGAAGACATCCTAGACATGGAACTGTTTGTTGTAAAGGCACTAAACTGGAACCTCTGCCCGGAGACTGTCATCTCATGGTTGAAACTATACATTCAGGTGGCATCTTTAAAGGATGATCCAGACGTTTTACTACCTCGGTTTTCTCAGGAGACTTTTATACAGATAACACAGCTTTTAGATTTGTGTATACTTGATATTAACTCATTGGACTACCAGTATGGGATATTGGCAGCTGCAGCGTTTTGTCACTTTACTTCTTTTGAAGTCGTTCAAAAAGTATCAGGTCTAACATGGGACACTATATCAAACTGTGTGAATTGGATGGCTCCTTTTGCCAAGACTGTCCGTGAAGGCTCTACTGTAGAGCTGAAAGAGTTCAAGAAAGTCTCCACCGAGGACAGGCACAATATCCAGACCCACACGGACTATCTATCCTTACTGGGTGCAGCTCACCAGAAACAGCAGGAAAGTTTGGGACGGTTATCGCCTGTGTCACTGGGAGGAATCCTGACTCCCCCGAAGAGCACAGAAAAGCCACCGACACACTAAACAAGGGTCCCGCTGCAGAAAGAAACCAATATGGATGGATCTATGTCTTAAGATGTGAATATGCTCAACAAAAGGAAGGGCCAGAAGAGTTTTAAAAGGCTGTGGTGCAGACTGTTTTGGTGTAGGAAGATGATCAACATGTTTATGAATTTCTGAGGCATTACCTTGAATCTGCACAATTCCCTAGAGCCTTGAGTGGAAGAGTTCATAGATGATGCTTGATGCATGACACCATACCTGCCTGGGACAGCGGCCGTGCGCTTCACTGTCTGAGCGAATGTAATCTGAATAATGACTGTTCAGCACGGGGCCATACAGGTATCAGTTCCACCcaaatgtgagctgcaatgcaATACTGAACTGAGCATTCTTGTGCAGAAATGTAATTCCTGGAAGACTTGAGTATTTGTAGTGGCGATGAGTGTTTGCTGTCAATGTGCAGGGAGTTTTATGTCAAGTATTTATCACTTTGTctttaattgtaaatatgtagTTAGCCCATAGTGTGAATTTGTAAATGAGGTAACCTCCAACTTTCTATAACTTAATCTCATTGCCAAAGGcaagtatttaattcaaaatacgcacattatttataatttaggACTCTTAACTTTCCAGCCTTTCCAGATTGATTGTGGGCAGAGGACATGAGTTTCCTACTCACAGCCAAGCTGTCAAATGGTTCATCATGTCCCCTGCTAAATACCTCTACTGGATGAGCCAGTTTAGCAGGACGGGATATCCGGATTCGATGCAGAACATTTGAAACCAGTTAAGCTATCGGTTAAGCTTCAGAAGCTTATAGCAATAGGTTTTATTATATACTTGtctatgtaaatatgtatacatgtatataaaacaatgacaaaatgcatttgttttaatgttta

Function

GO:

id name namespace
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity biological_process
GO:0051301 cell division biological_process
GO:0005634 nucleus cellular_component
GO:0019901 protein kinase binding molecular_function

KEGG:

id description
K06626 CCNE; G1/S-specific cyclin-E1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021817 True 2069 mRNA 0.44 11 30699349 30707723

Neighbor

gene id symbol gene type direction distance location
AMCG00021809 NA coding downstream 179836 30519001 ~ 30519513 (-)
AMCG00021806 NA coding downstream 229707 30462011 ~ 30469642 (-)
AMCG00021807 NA coding downstream 254425 30433927 ~ 30444924 (-)
AMCG00021808 NA coding downstream 270848 30426116 ~ 30428501 (-)
AMCG00021805 acot13,LOC102778390 coding downstream 303431 30394379 ~ 30395918 (-)
AMCG00021816 NA coding upstream 1102 30708825 ~ 30719230 (-)
AMCG00021818 NA coding upstream 22932 30730655 ~ 30741775 (-)
AMCG00021819 NA coding upstream 60011 30767734 ~ 30768744 (-)
AMCG00021823 gdf6a coding upstream 293263 31000986 ~ 31028447 (-)
AMCG00021827 ebag9,LOC107666870,LOC107705161,LOC107600620 coding upstream 334808 31042531 ~ 31051184 (-)
G88562 NA non-coding downstream 136549 30525746 ~ 30562800 (-)
G88545 NA non-coding downstream 273797 30425304 ~ 30425552 (-)
G88435 NA non-coding downstream 751809 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 857810 29838518 ~ 29841539 (-)
G88347 NA non-coding downstream 1418476 29279361 ~ 29280873 (-)
G88643 NA non-coding upstream 253980 30961703 ~ 30962096 (-)
G88736 NA non-coding upstream 1091029 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 1151686 31859409 ~ 31859833 (-)
G88762 NA non-coding upstream 1281051 31988774 ~ 31989050 (-)
G88795 NA non-coding upstream 1386979 32094702 ~ 32094939 (-)
G88527 NA other downstream 274737 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 956541 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 1627589 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 1916068 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 3779505 26899963 ~ 26919844 (-)
AMCG00021820 NA other upstream 170125 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 421860 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 1355662 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3552281 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3639265 34346988 ~ 34380295 (-)

Expression


Co-expression Network