AMCG00021818


Basic Information

Item Value
gene id AMCG00021818
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30730655 ~ 30741775 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021818
aTGATTGTCTTAGCAGAATTATGTTAAATCTAACTGATGATTATTTTGACAGAAATTCATTAAATGATGACCTTCTTTTGCCGTATACCCAGTCACTTGGACACGGGCCGTCCCACAGCCACAGGTTTGTAAGAGAATACCAGCCCATCATTCACGGCAATGTGACTTATGAAACCTGGACCAGTGATAAAACCGCAGCATTACCCGTAGTGGAAACCAGGATATTTGTATCTCATATTGGCAATGAGGATGAAAGTGGCAAATGGGTTTACGGACACCTGACGTTTATCAATAACCCACTGCGGACTGTTTCAGTGTTGGAGCCTGGAGGGCCAGGGGGGTGTGGGATTTTTCTTACCGCTACAGTAGAGGAAACGGCAAAACCAAGAAAGTGCCTGGTCGCTCAGAACGGCGGCTTCTTTGACACAACGACAAAACAGTGCCTTGGGAATGTAGTGAGCGACGGGAAACTGGTGCAAAACAGTGGGGGGATACAGAACGCTCAGTTCGGGATCAAGAAAGATGGAACTCTAGTTTTTGGCTATCTGTCAGAAGAGGACTTGCTGGATGAAAACAACCCATTTGTTCAGTTAGTGAGCGGAGTGGTGTGGCTTCTCAGGAATGGCACCATCTACATTAATGAGAGCATGGCCGCTGAGTACGGGGACACTCAGAAAACAGGGTCATTtgacacatttgtaaatgtgaCGTCCGCAAGAACAGCAGTTGGACACGACAAAGATGGGAAGCTGGTACTGTTCCATATCGAAGGCCAGACGACCATAAGAGGGATGAACCTGTGGGAAACTGCTAAATTTCTGAAAGACCATGGAGTTATTAATGCCATCAATCTCGATGGGGGAGGCTCTGCCACCTTTGTTGAGCATGGATCGCTTGCAAGTTATCCATCTGATCACTGGTATGTAAAATATGAGAACCATAATAACGGCATGTGGAGGTGCCCCCGGAGTGTGtccactgtgctgtgtgtgcatgagcCTGAGTGCCACCCGACAGACTGCAGTGGGCATGGCCAGTGTGTGCAGGGGGAGTGTCGCTGTGCTGATCACTGGACAGGGCCCGCCTGTGACACCCTGGACTGCCTGCCCTCTGCATGTGGACCCAATGGCGTCTGCACTCAATATGGATGTGTCTGTGATGCAGGATGGACGGGGAGTAACTGTAGCCAGGtcTGCCCGGCTGGCTCCTATGGAGATGGCTGTAACCAGACGTGCTCTTGTCAGAACGGTGCGTCCTGTGACAGTGTGCATGGCTCCTGTACCTGTGCTGCCGGCTTCCATGGAGACTCCTGTGAGCAAGAATGTCCTCTTGGTTTCTATGGACAGAACTGCAAAGAGGAGTGTCGGTGTACGAACATGTGTCCGTGTGACCCAGTGACTGGCAGCTGCAACATCACTTATAAAGGAGAGAAGAACTACACCATGCAAAGAGTGGGTCACTGCCTAGCTATAGACATGTTCAAGTCATGGAAGCAAGAGGATGCCACTGAGAACCCAAAGTCATATTTTTCAGAGAAGACCTGGATTACGATCACAGTTGTCTTGGGCCTGCTGCTGCTAGCCAGCACTGTTGGCAACCTGATCCAGATTTCTGCCAAATCACCTCTTTACAAGCGTGAGATTTACTCCTACTTTCCCCTGAATGAAATGAATGGAAACCTAAACCATGCAGAGCTCAATTATGGAGGCGACCTCACTGAAGGCATGCAGAAGCAGAATGATTCCGATTCTGAG

Function

GO: NA

KEGG:

id description
K01125 NAGPA; N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021818 True 1754 mRNA 0.49 10 30730655 30741775

Neighbor

gene id symbol gene type direction distance location
AMCG00021816 NA coding downstream 11425 30708825 ~ 30719230 (-)
AMCG00021817 NA coding downstream 22932 30699349 ~ 30707723 (-)
AMCG00021809 NA coding downstream 211142 30519001 ~ 30519513 (-)
AMCG00021806 NA coding downstream 261013 30462011 ~ 30469642 (-)
AMCG00021807 NA coding downstream 285731 30433927 ~ 30444924 (-)
AMCG00021819 NA coding upstream 25959 30767734 ~ 30768744 (-)
AMCG00021823 gdf6a coding upstream 259211 31000986 ~ 31028447 (-)
AMCG00021827 ebag9,LOC107666870,LOC107705161,LOC107600620 coding upstream 300756 31042531 ~ 31051184 (-)
AMCG00021829 NA coding upstream 316284 31058059 ~ 31093370 (-)
AMCG00021831 NA coding upstream 351633 31093408 ~ 31108646 (-)
G88562 NA non-coding downstream 167855 30525746 ~ 30562800 (-)
G88545 NA non-coding downstream 305103 30425304 ~ 30425552 (-)
G88435 NA non-coding downstream 783115 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 889116 29838518 ~ 29841539 (-)
G88347 NA non-coding downstream 1449782 29279361 ~ 29280873 (-)
G88643 NA non-coding upstream 219928 30961703 ~ 30962096 (-)
G88736 NA non-coding upstream 1056977 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 1117634 31859409 ~ 31859833 (-)
G88762 NA non-coding upstream 1246999 31988774 ~ 31989050 (-)
G88795 NA non-coding upstream 1352927 32094702 ~ 32094939 (-)
G88527 NA other downstream 306043 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 987847 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 1658895 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 1947374 28781802 ~ 28783281 (-)
AMCG00021723 hsf1 other downstream 3810811 26899963 ~ 26919844 (-)
AMCG00021820 NA other upstream 136073 30877848 ~ 30888588 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 387808 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 1321610 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3518229 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3605213 34346988 ~ 34380295 (-)

Expression


Co-expression Network