AMCG00021826


Basic Information

Item Value
gene id AMCG00021826
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 31221983 ~ 31225381 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021826
atGGAGAATGTATCGTTCATTCAAAATAACCAGACTGTCGGAAACTGGACCGAGCCGAGCACTGAATACAAGGTGGCGAGCACCGTGCTGGTTATCGCCATCTGCGGGATTGGGATTGTGGGCAACATCATGGTGGTTCTGGTGGTACTTACAACCAAACACATGCGGACCCCCACCAACTGCTACCTGGTCAGTCTGGCTGTGGCTGATCTCATGGTGCTGATCGCTGCTGGGCTGCCGAACATCACCGAGAGCTTTTATGGATCCTGGGTCTATGGCTACGTTGGATGCCTGTGTATAACGTATCTCCAGTATCTTGGCATCAATGCCTCCTCTTGTTCCATAACTGCCTTCACCATCGAGCGGTACATTGCAATTTGCCATCCCATTAAAGCCCAGTTTCTCTGTACCCTGTCCAGGGCCAAGAAGATCATCGTGTTTGTCTGGGCTTTCACGTCTTTCTACTGTGTCATGTGGTTTTACCTGTCAGACACCAAGCAGATGATTTACGCAGATGTCACGGTGGTGGTCTGCGCCTACAAAGTGTCCCGAAACCTGTATCTGCCCATCTACTTCTTGGACTTtgccatcttttatgtggtgcCTTTAATGCTGGCCACGATTCTGTATGGACTGATCGCACGAATCCTGTTCCTGAATCCCATCCCCACAGACCCCAAAGAAAATACCAAGAAGTGGAGAAATGAGAGCAGCCACGCAAACCAGACTTTTAGTTCAAAATGTTCCAGTCGCTGTTCCAGTAGCACAGCATCTTCCCGGagacagGTGACCAAGATGTTGGCAGTggtggttgttttgtttgcgCTCTTATGGATGCCCTATCGAACACTAGTTGTGGTCAATTCTTTTCTCACCCAGGCTTACTTAGACACCTGGTTTGTCTTATTCTGCCGAATCTGCATCTACCTTAACAGCGCCATCAATCCCATCATCTACAACGCCATGTCCCAGAAGTTCAGGGCTGCCTTTAAGAAGCTCTGCAAGTGTAAGCAGCAGCATTCTGAGAAGCCAACCACCTACAGCATGGCACTCAATTATAGTGTGATCAAAGACATTTCCAATGGAGAGAGCCTGGATCACTTCACCACAGAGCTAGATGATATGACCGTCACCGAAGAGTTCCTGCCCAGCAAGAAACTATCATTTGATGACACCTGTCTTTCTGGCAAGGTCACTTTCAGCAAGGCGTAA

Function

GO: NA

KEGG:

id description
K04282 TRHR; thyrotropin-releasing hormone receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021826 True 1212 mRNA 0.49 2 31221983 31225381

Neighbor

gene id symbol gene type direction distance location
AMCG00021831 NA coding downstream 113337 31093408 ~ 31108646 (-)
AMCG00021829 NA coding downstream 128613 31058059 ~ 31093370 (-)
AMCG00021827 ebag9,LOC107666870,LOC107705161,LOC107600620 coding downstream 170799 31042531 ~ 31051184 (-)
AMCG00021823 gdf6a coding downstream 193536 31000986 ~ 31028447 (-)
AMCG00021819 NA coding downstream 453239 30767734 ~ 30768744 (-)
AMCG00021828 LOC107600623,LOC107666844,LOC107551188,LOC105905365,LOC107705775 coding upstream 85205 31310586 ~ 31350368 (-)
AMCG00021848 med30,LOC107706236,LOC107754270 coding upstream 786061 32011442 ~ 32018134 (-)
AMCG00021847 NA coding upstream 806307 32031688 ~ 32037579 (-)
AMCG00021846 NA coding upstream 821729 32047110 ~ 32047584 (-)
AMCG00021845 NA coding upstream 870144 32095525 ~ 32097519 (-)
G88643 NA non-coding downstream 259887 30961703 ~ 30962096 (-)
G88562 NA non-coding downstream 659183 30525746 ~ 30562800 (-)
G88545 NA non-coding downstream 796431 30425304 ~ 30425552 (-)
G88435 NA non-coding downstream 1274443 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 1380444 29838518 ~ 29841539 (-)
G88736 NA non-coding upstream 573371 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 634028 31859409 ~ 31859833 (-)
G88762 NA non-coding upstream 763393 31988774 ~ 31989050 (-)
G88795 NA non-coding upstream 869321 32094702 ~ 32094939 (-)
G88831 NA non-coding upstream 1466890 32692271 ~ 32692496 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 89798 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 333395 30877848 ~ 30888588 (-)
G88527 NA other downstream 797371 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 1479175 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 2150223 29069201 ~ 29071760 (-)
AMCG00021849 NA other upstream 838004 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3034623 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3121607 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 3153320 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 4149635 35375016 ~ 35395771 (-)

Expression


Co-expression Network