AMCG00021829


Basic Information

Item Value
gene id AMCG00021829
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 31058059 ~ 31093370 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021829
ATGTCACCGAGACCAATGCAACACCACATATTGCAAGGGAAGACAATGACTCTGATACAAtgtctctttaaatttgtcGCAGGCGTGCCGGTGAATGTTTCAGATTTGGATCTACAGTACATTCTGCAGGGGATCCCTGAAATGGGCCGAATCCAAGTCAGTCACTGGGGAGACTGTAAGGGTTACAATTGGAAAGTGGAATGGCTGTCCAGACCTGGAGACCAACCCCTAATCCAGGTtcatattctgtttgttttcacccATGTGTTTGAAAGGATATCATCaggtttttgtttcttatatgGTTACATGTCGTTACTTATTAGCCCCACCCCTTTCCCCAATCAGATCAATAGCTCATCTGTCACCGGGCCAGCCTGCAGTATACAAGTCAGTGTTGTACAAGAGGGTGGACTTTTCAAACAGAACATCATGGGAGATTATCTGCGAGTGCCTGAGACCAAGCCACAGGTTCAAGTTTTCATCAATGGCATCCCGTCAATGTGTTCTGGTGACTGTGGGTTTCAGTGGAGCGCAGCAAAGACTCCTGTTGTTTCAGATGTCAGCCCAACAGAAGGATCAAATGCTCTAGGAACAATTCTGACCATCACAGGCTCCGGTTTTGGCAGTGGAAATGCCTCAGTTTTGGTGGGAGATACAGAATGTGCAATAATTCAGATGAACAgtaCCTGGATCACCTGTACAGTGGGTAATGCAAGTGCTGGCACCTACCCAGTTTCTCTCAGCTTTGCAGAACTGGGGCTTGCTCTGAATGTTAATGCGTTTAATTTCACCTACCAAATGGGTGTCTTGAACATCTCCCCTTCGTCCGGCAGCATTGCAGGAGGCACGGTTCTCACAGTGTCAGGGTATGCCTTTAGCCAGGACATAATGATTCGTATTGGGTTGAAGATGTGTGCTGTGGTCTCTGCAAGCTTCAATGAACTGAAGTGTAGAACTCCACCTGGAAGCGCCGGTACCGTTACTATGGCTTTGAAAATGGGTGAAACTGAGGTGTCAGTCAACGATCCTTTCACTTACGATGAGTCTAAGACGCctttaattacagaaataagTTCACGGACTACTAATGTAATGGGAAACATGAGTATTTCCATTGGAGGAAGCAACTTTCAGGACCAAACCAGCAGTAGCTCTGTCTCTATTGGCAGTGAAACATGTGAAATACTTGAGTGGTCTTCAAACATCATAACCTGTTCCCTGCCAAAACTTCCTCCTGGCCTATATAATATCTTTGTACAAGTTGGAAACTGGGGATATGCAGCCGTGGGAGCTGGTGTGAATGCTTCcatagaatacattttgaaggtCACAGATGTTTCCCCATTGCAAGGTTCTCTGTATGGGGGTACAAAAGTCATTGTGACTGGATTGGGGTTCAGTGCACAGGCAGAGGACAACACAGTGACTTTTGcTTATGGTGTTGGATATGCATGGAGCCCATCTTCTATGCAGGTGTCTGTTGGAGACACTGTCCAGTGGCAATGGCAGGCTCCCTATTTAGTCAAAGGGCTTGGCTACAGGGTGTTTAGCGTCTCCAACCCCAGTGACACAACCTACGATGGCATTGGGTTCACCAGTGGAGACATCAAAACTGATCTAGgaGTTTTCCGCTATCGCTTCACAGTGCCCGGTGTCTACTATTACAGCAGTGGCTTCCTAGACAACACAAACACGAGATCCATGCAAGGAGTGGTTCAAGTTCAACCAGTGCAACCAAATAGTGGCAGGTTTCAGCTGACAGTGGGAAACATCAGTGCACCAACAGatGTGCAACCCATGATGCCAACAGTGACAGAATGCATATCCACACCTCCAAACTGTTCCCAGTTCCTCGAGGCAGAAGGGGATTTTTCATTCTACTTCTCAGACTGTTACTCTCCAACAATCACTGTCATCAGTCCATCGAGTGGAACGGTCTATGATGTCATACAGATAAAAGGAATGGGTTTCAGCAACACCAGCTGTGCAAATGAGGTGAAAATCGGAGAATATCCTTGCATTGTTATCAATAGCACCATGACAGAAATTAACTGTAACCTGAGCCCAGATAATGGCATGGGTGTAGGAGTTGCAGAACTGGTGTCTGTGCAGGTCAACAACTTGGGCACTGCCATCAACTCCATCGTGAAGGAGTTCAGCCGTCGCTTTGTTCTGTTACCCGTCATTGATTCCATCAGCCCAGACACTGGAGCCACCACAGGACAAACCAGGGTGACCATCCACGGCTCTGGTTTCTCTGGCCAAGCAGACAGTATCGCTGTGACTGTAGCCAAACAACCGTGCTCAATTGTGTCCATTACCTACACAGCCATCACCTGCGACACCTCTCCTTCGACTGTCCAGACAGGGGACATTCAGGTTTCCATGCTCGGAATCTCAGCCATCTGTCACTCCAACTGCACCTTTGAATATTCCGACTCTTTTGTACCCTCCATTTCTAGTGTCTCTCCAGCCATCATCAATAGCAGCTCAACGATTCTGACAATCAGCGGATCAGGATTTGGAAGCCAGCCTGAAGACGTTGCTGTTTTTGTCGATGGTTTGATATTAGAAGTGAGCGCAGTCACCAACACAAACGTGATTTGCACGGTTGGGCCATTATTTGCAGGAGCTCATATCCTGACGGTTGTTGTCATGAGCAAAGGTCTGGCCACGGGCAGCGCCACACTTCAAAGTGTGGCCAGTGCCACCCTCACACCAAACTACGGAAGCGTCAAGGGTGGAACTCCTTTATTCATCATGGGTAATGGCTTTTCTCAGGGCAACACCTCTGTAACTGTAGGGGGCTCCCCTTGCCAGGCTGTTTTTGTGACACCAAGTGAAGTCCAATGCATAACTCCAGCCCACAGTGAAGGGACGGCTGAAGTTAAAATTCAGGTCCTCTCAATCAGCTACCCTACGCTGAACTACATATATGCCTGGTCATATACTCCAAATATCACAGCAGTGAGCCCTGGAACAGGCTCAAGTGGAACAGTGATCACTCTTACAGGCTCAGGGTTTGGCTCAGATCCTGAGCTTGTCTCTGTGACAATCGACGATACTCCCTGCAACGTGTCGGCAGTGACTGATGTGCAGATTCAATGCTCAGTGGGAAACCATGCAGGAGGCACTTTCCCCGTAATGCTCCATCACGTGCTGAAGGGATTTGCTGCCTCAGCTGTTGTCTTCAAGTATGAATTGATACTTGCATCAGTCACACCAGTCGAAGgaaGCTATGGTGGGGGTTCCATTTTGACTCTGCAAGGATCCGGTTTTGACCCTCAGACTTCGCAAGTGCTGGTCTGTAGCCAAGAATGCAATGTCTTGAGCCAGATTTCTACATCCAGCAGCCTTTACTGTGAGGTCCCACCCAGCAATGGTACTGGAACACAACAGGACTGCACTGTCAAGGTCATGAATGGACAGGAATCAGTGAACGTATCGAATGGCTTCTCTTACAAATTGTCCCTGACACCTGTAATCACTGAAGTATCTCCAAGGAGAGGAGGGACAGCAGGAGGCACCAGGCTCACAATTACAGGCTCCAATTTCAGCTTAAATAGCAGTGACATCACAGTCACCATCGCAGGGTCTGAGTGTGACGTACAATCTGCAAACAGCACCCAAATCATCTGTATCACAAATGCGCAACCCAAGACACAGAAGACCAAAGTTAAAGTCTACACTGGCAATAACGGCATTGCAAAGCTGGACAATGCTGATTTCTTCTACATCGACGTGTGGTCCTCCAAATACACGTGGGGTGGGCTGTCACCTCCTGAGATGGGAACCTTTGCTGTGATCACCGAAGGACAAACAATCCTGCTGGATACCAGTACACCTGTATTAAAGATGCTGCTTATTCAAGGTGGAACTCTGTTGTTCGATGAAGCTGATATTGAACTACAGGCTGAAAatattatgatcacagatggtGGAGTTCTTCAGGTTGGCACCGAAGCAGAACCTTTCCAGCACAAAGCCATCATCACACTGCACGGCCACCTCCGCTCACTGGAGCTGCCTGTGTATGGCGCCAAAACCCTGGCAGTCAGAGAGGGGATATTGGACCTCCATGGAATGCCAGTTCCTGTTACTTGGACCCATTTGGCCGAGACGGCCGCCAGTGGCTCTTTAACACTGACCCTGAAGAGAGCTGTGACGTGGAAAGCAGGAGATGAAATTGTTATAGCATCCACTGGTCACAGGCATAGCCAAATTGAAAATGAGGTCAAGAAAATTGCCTCCGTGTCAGCTGATGGCAGGACCCTGAACCTGACAGAACCTCTGAGCTACAGTCATTTAGGGGTCTCTGTCACATTGCCAGATGGAACAGTGTTTGAAGCGAGAGCAGAAGTTGGTCTCCTCACAAGGAATGTTGTGGTCAGAGGGTCAGATAATATTGAATGGAGTGACAAAATAGAGGCCTGCCCAGATGGATTTGACACAGgGGAATTCGCTACCCAAACTTGTTTCCAGGGAAGATTTGGGGAAGAAGCAGGAAGTGATCAGTTTGGAGGTTGCATTATGTTTCACACTCCAAGGCCAAGTGAAAGCCTGGCAATTGGAAGAATTGAGTATGTTGAGGTATTCCATGCTGGGCAGGCCTTTAGACTCGGTCGCTACCCAATACACTGGCACCTGATGGGAGATGTCCAATTCAAATCCTATGTCAGAGGATGTGGGATTCATCAGACGTATAACAGGGCCGTGACCATACACAACACCCACAACCTTCTGGTGGAGAAAAATGTCATCTACGACATCATGGGAGGAGCTTTCTTTATTGAAGATGGGATTGAGACTGGCAACATCCTCCAGTATAACCTGGCAGTCTTTGTGCACCAGAGCACCAGTCTCCTGAATGACGACGTCACACCCGCCGCCTACTGGGTCACCAACCCCAACAACACCATCCGCCATAACGCGGCAGCGGGCGGCACCCATTTTGGCTTCTGGTACCGAATGCACGATAACCCTGATGGCCCTTCTTACGACCCAAACATTTGCCAAAAACGGGTCCCTCTTGGAGAGTTTTTCAACAACACCGTCCACTCTCAAGGCTGGTTTGGGATATGGATTTTCCAGGAGTATTTCCCCATGAAAACAGGAGCCTGTTACTCCTTCGAGCCTGAGCCAGCCATTTTCAATTCACTGACAACATGGAACTGTCAGAAGGGGGCTGAGTGGGTTAATGTGGGGGCTGTCCACTTCAACAATTTCCTGATGGTCAACAATGAAATAGCTGGCATTGAAACCAAGCGCATTATTTCTTCGGCCGTTCGAGGCTGGGGTCAAACAAGTGGGGCCGCGATTACAAACGCCACCATAGTTGGCCATGTGGATGAACTGGGCCTGGGAGTCAACTACTGCACTACCCGGGGAATCATTCTTCCTTTCGACGATGGACTGAGCATCATGTCTGTGAAGTTTCTGCTCTTTGACCGCCCAACATGTGCTGCCATTGGGGTGACGTCAATCGATGGAACATGCACATTCAAATGTGGAGGCTGGAGTGCCCGGTTCAGTGGAATCCAATATTTCAACACTACCAATAAAGCTGGCTTCAGGTGGGAACATGAAGTAGTTTTGATTGACAGCGATGGTTCTCTGACAGGCCAGGCTGACAATAAAGTGGTGCCTCAGAGTGGGCTGCTGGACCCCTCCCATTGTGCACAGAGAGCAGAGTGGAGTATGGGATTTCCAGGGTTTGTGTGCGACTCCACTGTGGGCTTCCACCGAGTTGCCTTCAACAAcccctccccttcctctttACAGGCAAAGAACGTCATCATGTCCAACTCTTATGGCAACAGTGTAGTTCCATACTTAACAAAAAGACTGACCCATGAACCTGGCTGGATGGCTTTACTTCCTGATTCCAACTCCATACATTGGCACTTTGAAAATGTGGATCACATCACTGACATATCCTACAGTTCTATGTTCTATGGGTTCAGGCAACAAGATAATATCATCATCTCCCACAACCTGACCCAACGCCCAGATATGTTCCACATAATTGATGTAAGAAATGAATCAACACACCCTCTGAACTTTAGCAACAACCAAAATGGAGATTGGTACTTCAATGATAACACAACAACTGTATATTACATGGtgtctggaaagaaaaatgtgagaAGCAGACGCTCCACTAGTGTCGACCCCTCCACGTCTGACATAGATGTGGAGTTCTCAGTGTACAGATATTACTATAAGAACTGCATCTCACCTCCTCCGCTTCCTGCATTTCCTCCAATTCCTTCAACTGGCAATCTTGGGACAGTTGGAGAAGGGAGGCCTGAAAACTATgtCTTATGGTCCAATGAGTCATTCTGGAAGTCTTCTCCAGAAAACAACTATGCCGTTCCAAAAGAAGGAGCAGATGTGGTGATACCAGCAGtaATATGGATGGTCTTGGATATTGATGTTCCGTCATTTAACAAAATCACTGTCTATGGAGTATTGGAACTGCCAGACAACATTACTTCCCCAGCTACACTTGCTGTAAACAGTACTTTCACATACAGGAAGATCATCCTCAATGTAACTTACATATCAATCCAGGGTGGCAAACTATTTGCAGGGCGGCAGGACGACCCTTTTAAAGGTGAACTGGAAATCATTTTGAGAGGAAACCACTTTACTCCTGACTGGCCTTTGTCTGAGGTTAACCAGGGAGCAAAGGTGATAGGTGTGTTTGGTGTTCTGGAGCTTCATGGGCTGCCTCGATCCGTGTACCACACCAAACTTGCCAACACAGCCCCAGCCGGCTCCTCCATCATAACTCTAAAAGATGCTGTTGATTGGAAGGTGGGAGATGAGATTGTGATTACAACAACCAGCTATGACCCCTGGCAGACAGAAACCAGAAAGATTGCAATGATTTCAGAAGATGGACAAAGCTTGACCCTCAATAAATCTCTCTCCTATTCACATGCAGgaGAGAATTTCAATGTCACAGGTGGACAACAGTCTTACAGTTTGGCAGGAGAAGTTGGTCTCCTAAGCAGAAACATTAAGATCATCGGTGAAGACTATCCAAACTGGTACCAGGAATCTTTTGGGGCCCGAGTTCTGGTCAGCTCCATCTCATATTCAGGAATTCAGTATAAAGGATATGCCAAAATCAGAAATGTTGAATTCTACCATTCTGGACAGGAAGGCTATCGAGACTACATTGATCCAAGATACTCTGTGGCTTTTGTTAATCTGGGAGAGGTCACAATTAATGACTCCTACGTCCAAGGCTGTGCTTTCCACCATGGATTCTCACCTGCCATTGGGGTTTTTGGAACCGATGGCTTGACTATTGATGACAATGTGATCTACTTCACCGTTGGAGAGGGCATCCGAGTCTGGGgaaataagaacataattaGGAGGAATCTTGTGAGTATGTCTGTATGGCCTGGAACTTATCAAGACAGAGAAGAAACAACAAACACTCTGTGGCACGCTGCCATTGAGGTCAATAATGGCAGGAACAATGTGCTACAAGACAATATTGTGGCTGGTTTCGAAAGAGTGGGATATCGGATCAATGGAGAACCATGTCCAGGTATTTTCAATCCAGTGGAAAGCTGGTACAACAACGAGGTCCATGGAGGCTTGTTTGGAGTGTACATGAACAGAGACGGCCTGACCAACTGCTCTCACATTCAGGGATTCACAGTCTGGAAGTGCTGGGACTATGGCATCTATTTCCAGACAGAAATGAGTGTCCAAATCTCAAACATCACACTAGTAGACAATGGGATGGGAATTATGTCAATCATTTTCACACCTCCCTCCGTGTTGCATCTGTACTCTGACAAAACAGTTCAGATTCAGGATGGTCTGATTGTGGGAAGCAGCCCAAACTTCAACTGCTCCGATGTTCTTAAGGTCACAGATGCCAATGTTAAACTCAGTTCAAGTCACAGAGCACCCCGGCCTCCTACAGGTGGAAGAAGTGGAGTTTGTTGGCCAACTTTTGCCTCGGATCACAATGGCGCACCTGATAAACCTCATGATGGATTGATGAACTACAATGCTATCAGTGGACTTCTGACGGTGACTAATACCGTGTTCGAGAGTTTTCAGAGTGTCTGCTCCAGAGAGAAGAATGTGATATTTATGACCAGTCCTAATAATGAAGACCTACAGCATCCAGTGCATGTTCAAAATCTAACAATAGTCAACAGCACAGAGGATGCCAAGATTTTCATACACAGACCAGATGTGACGttaAGTAAGATAAGTGTAACACTGCATGTTGTCCTCAGGAAGGCAAACCCTTCTGACTGTGTGGATATGGACTGTGATGCAAAGAAGAAAGCTTTGTTGAAGGACCTGGATGGCTCCCTCTTTGGTAATGTGGGAGCTGTGGTTCCCCAGTCAGAGTATCAATGGAACGGGGACAAGCGACACGGCCTGGGCGATTACAGAATCCCCAAAGTTATGCTCACGTATCTGAATGGCAGCCGCATCCCGGTTAACCAGCTGGCACCATATAAAGGCATAATCAGGGATTCCAGCTGCACATACATGACTGAATGGCAGAGCTACAAATGCTTTGGTCTGAACTACGAGATGCTGGCCATTGAGAGTCTCGATGTCGATACAGAGACGAGGAGACTGTCTCCAGTGGCTGTGCTTGGCGATCGTTACATTGACCTCATTAATGGTAAAGACTGTACTGGCCCTCAAGACCATGGCTGGTGTGCAGGATATACGTGTCAGAAAAGagtttctcttttccacagCATTGTGGCTACAAACAAGTCATACGACATTTTCTTCACTAGCACCAGCCCTCAGAAACTGCGCTTCATGCTTCTCAATGCTGACAGCaccaaaGTTGTGCGTGTTGCAGTTTTTTACTCCAGTCCTCAACGTTTAGATGTTTATGTGCAAAATAAACTGGTGGCTCCAACAAATGCCAATTGGAATGACCAAAAAACGGACTACACACTGGATGAGCCTACTTACCCAGGGCAATATGTTCCACAAATGAATTCAACGGTCTACGGCTCGAACTACTTAGACAATGATTACAAGATGCTCAATGTTTTAGTGCGAGGCTCCATTCCAGTGGAAATCCacacctctcctctcctcttcatCTCCTTCCGACTGCCTGCTATGACCATTGAGCAATTCTTTGGGAAAGACTTGTTGAGAAACCTGGCTGCATTCCTCAAAGTCCCCCAGGGCATGATTCGCATCTCAAAGGTGGTGAGGGAGAACAGCAGACGCAGGAGACGGGCAGCTGGCCTTTCAGTCCAAGTGCAGATCAGTCAACCTCCAGTTCAGCAGATCAGCAACAGCTCCAGCACAGATCAACAGAATTATGACCTCTTGAAAACCATTGCCAGTAACATAGGCCAGGCAGCTGTTTCTGGAAATCTGAGCCAATCTATTGGGTTCAATGTTTCTTCTGTGGGCATTACCCCCCCAGTACCTCCACCCACTGACGCAGCTTGGAGCCAGGTGTCTGCACAGGATGTTAGCAGAACAACGCCTGCGGAGAGCTATGTATCAAGTGTGTCTGCTCTGGTCGTGGTTGTTCAGCCTGTAGCTGTAGAGGGGGAACAACTCATGAGACAGCAACCCTGTATCATGGCAGTGGATTCTGGCGGcaactgtgtgtctgtaggaGTCACCACCCTCACCCTGTCAGCAGTGCTCAAAGACTCTAACAGTAGCATAATTCCAGGACTGACAGGGAATAGCACGATCCCCTTCAGCAACTGCTGGGCTAACTACACAGACCTCTCCCTCAATACAACTGgtaCAAACTTGACCCTCACTTTCACACTGAATCAAGTGGAAGCGAAATCAAAGTCCTTCAGCAACAGAGCAGCCGTGGTTAACCCAACAACCTCTACTGCTAACCCAACAGCTCCAAGCGGCAATGattcagaccaaagcagcagcacatCGAGTCTGTATCGCTGCTGTGCGGACAACACGGAGGACAGCGGAGGCTCCAACACGCCCTTCTTTTCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021829 True 10005 mRNA 0.48 53 31058059 31093370

Neighbor

gene id symbol gene type direction distance location
AMCG00021827 ebag9,LOC107666870,LOC107705161,LOC107600620 coding downstream 6875 31042531 ~ 31051184 (-)
AMCG00021823 gdf6a coding downstream 29612 31000986 ~ 31028447 (-)
AMCG00021819 NA coding downstream 289315 30767734 ~ 30768744 (-)
AMCG00021818 NA coding downstream 316284 30730655 ~ 30741775 (-)
AMCG00021816 NA coding downstream 338829 30708825 ~ 30719230 (-)
AMCG00021831 NA coding upstream 38 31093408 ~ 31108646 (-)
AMCG00021826 NA coding upstream 128613 31221983 ~ 31225381 (-)
AMCG00021828 LOC107600623,LOC107666844,LOC107551188,LOC105905365,LOC107705775 coding upstream 217216 31310586 ~ 31350368 (-)
AMCG00021848 med30,LOC107706236,LOC107754270 coding upstream 918072 32011442 ~ 32018134 (-)
AMCG00021847 NA coding upstream 938318 32031688 ~ 32037579 (-)
G88643 NA non-coding downstream 95963 30961703 ~ 30962096 (-)
G88562 NA non-coding downstream 495259 30525746 ~ 30562800 (-)
G88545 NA non-coding downstream 632507 30425304 ~ 30425552 (-)
G88435 NA non-coding downstream 1110519 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 1216520 29838518 ~ 29841539 (-)
G88736 NA non-coding upstream 705382 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 766039 31859409 ~ 31859833 (-)
G88762 NA non-coding upstream 895404 31988774 ~ 31989050 (-)
G88795 NA non-coding upstream 1001332 32094702 ~ 32094939 (-)
G88831 NA non-coding upstream 1598901 32692271 ~ 32692496 (-)
AMCG00021820 NA other downstream 169471 30877848 ~ 30888588 (-)
G88527 NA other downstream 633447 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 1315251 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 1986299 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 2274778 28781802 ~ 28783281 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other upstream 36213 31129583 ~ 31132185 (-)
AMCG00021849 NA other upstream 970015 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3166634 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3253618 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 3285331 34378701 ~ 34388010 (-)

Expression


Co-expression Network