AMCG00021830 (eny2,LOC100694417,LOC103393926)


Basic Information

Item Value
gene id AMCG00021830
gene name eny2,LOC100694417,LOC103393926
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 31129583 ~ 31132185 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021830
ATCTCAGCAGTGTCGGTACGGCGTGTTACTGGGAGTTGTTTCCCAGGGAGCgaagtaaaaaagaaacacaaaacattgcATGTAACATCAATTAAACCTCAGTGGTTTTTGATAATGCGGTCGGTTTGTTGACACACTCACGAACAAAGGAAGACTGTTAGTCTGTCCATTTACTGGATTCAAAAGTGAAGAACATGAGTAAAGACGCGCAAATGAGAGCAACAATAAACCAGAAACTAATAGAAATGGGTGAACGAGAGCGATTGAAGGAGTTGCTCCGAGCCAAACTTATTGAATGCGGATGGAAGGACCAGTTAAAAGCGCACTGCAAAGatgtGATCCGGGAAAAAGGGTTGGATCATGTGACGGTGGAAGACTTGGTTGCAGAAATCACACCGAAAGGACGAGcTCTTGTACCAGACAGCGTGAAGAAAGAACTTTTGCAGAGAATAAGAGCATTTTTAGCTCAGCATGCCACCCTATGAATGAAACAGTTACtgctattttcttttcattttttctgtttcatttacaaatcaagtgtttttcttttgctataATGCTACAGTTGAAACTAATCAGTGCTACCTTTGTTTTGTCTCTAGTTTTTGATATTGCTGcttttttgcaaaacaattagtgatatataatgcaattttaataataaaacaacattgttca
>TU110664
CCGGAATCTCAGCAGTGTCGGTACGGCGTGTTACTGGGAGTTGTTTCCCAGGGAGCgaagtaaaaaagaaacacaaaacattgcATGTAACATCAATTAAACCTCAGTGGTTTTTGAGTGAAGAACATGAGTAAAGACGCGCAAATGAGAGCAACAATAAACCAGAAACTAATAGAAATGGGTGAACGAGAGCGATTGAAGGAGTTGCTCCGAGCCAAACTTATTGAATGCGGATGGAAGGACCAGTTAAAAGCGCACTGCAAAGatgtGATCCGGGAAAAAGGGTTGGATCATGTGACGGTGGAAGACTTGGTTGCAGAAATCACACCGAAAGGACGAGcTCTTGTACCAGACAGCGTGAAGAAAGAACTTTTGCAGAGAATAAGAGCATTTTTAGCTCAGCATGCCACCCTATGAATGAAACAGTTACtgctattttcttttcattttttctgtttcatttacaaatcaagtgtttttcttttgctataATGCTACAGTTGAAACTAATCAGTGCTACCTTTGTTTTGTCTCTAGTTTTTGATATTGCTGcttttttgcaaaacaattagtgatatataatgcaattttaataataaaacaacattgttcatgtgtgtgtctgcttcaTTGGATTATAAGAATATTTTACTGGTAGTTTTA

Function

symbol description
eny2 Predicted to enable chromatin binding activity and transcription coactivator activity. Predicted to be involved in histone deubiquitination; poly(A)+ mRNA export from nucleus; and regulation of transcription, DNA-templated. Predicted to act upstream of or within chromatin organization; mRNA export from nucleus; and protein transport. Predicted to be located in nucleus. Predicted to be part of DUBm complex and SAGA complex. Orthologous to human ENY2 (ENY2 transcription and export complex 2 subunit).

NR:

description
PREDICTED: transcription and mRNA export factor ENY2-2

GO:

id name namespace
GO:0006368 transcription elongation from RNA polymerase II promoter biological_process
GO:0006406 mRNA export from nucleus biological_process
GO:0015031 protein transport biological_process
GO:0016578 histone deubiquitination biological_process
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0071819 DUBm complex cellular_component
GO:0000124 SAGA complex cellular_component
GO:0070390 transcription export complex 2 cellular_component
GO:0005643 nuclear pore cellular_component
GO:0003713 transcription coactivator activity molecular_function

KEGG:

id description
K11368 ENY2, DC6, SUS1; enhancer of yellow 2 transcription factor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021830 True 681 mRNA 0.39 6 31129633 31132180
TU110664 False 663 TUCP 0.38 5 31129583 31132185

Neighbor

gene id symbol gene type direction distance location
AMCG00021831 NA coding downstream 20937 31093408 ~ 31108646 (-)
AMCG00021829 NA coding downstream 36213 31058059 ~ 31093370 (-)
AMCG00021827 ebag9,LOC107666870,LOC107705161,LOC107600620 coding downstream 78399 31042531 ~ 31051184 (-)
AMCG00021823 gdf6a coding downstream 101136 31000986 ~ 31028447 (-)
AMCG00021819 NA coding downstream 360839 30767734 ~ 30768744 (-)
AMCG00021826 NA coding upstream 89798 31221983 ~ 31225381 (-)
AMCG00021828 LOC107600623,LOC107666844,LOC107551188,LOC105905365,LOC107705775 coding upstream 178401 31310586 ~ 31350368 (-)
AMCG00021848 med30,LOC107706236,LOC107754270 coding upstream 879257 32011442 ~ 32018134 (-)
AMCG00021847 NA coding upstream 899503 32031688 ~ 32037579 (-)
AMCG00021846 NA coding upstream 914925 32047110 ~ 32047584 (-)
G88643 NA non-coding downstream 167487 30961703 ~ 30962096 (-)
G88562 NA non-coding downstream 566783 30525746 ~ 30562800 (-)
G88545 NA non-coding downstream 704031 30425304 ~ 30425552 (-)
G88435 NA non-coding downstream 1182043 29888445 ~ 29947540 (-)
G88434 NA non-coding downstream 1288044 29838518 ~ 29841539 (-)
G88736 NA non-coding upstream 666567 31798752 ~ 31836239 (-)
G88742 NA non-coding upstream 727224 31859409 ~ 31859833 (-)
G88762 NA non-coding upstream 856589 31988774 ~ 31989050 (-)
G88795 NA non-coding upstream 962517 32094702 ~ 32094939 (-)
G88831 NA non-coding upstream 1560086 32692271 ~ 32692496 (-)
AMCG00021820 NA other downstream 240995 30877848 ~ 30888588 (-)
G88527 NA other downstream 704971 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 1386775 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 2057823 29069201 ~ 29071760 (-)
G88242 LOC106595015,LOC106598893,LOC106597821 other downstream 2346302 28781802 ~ 28783281 (-)
AMCG00021849 NA other upstream 931200 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 3127819 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 3214803 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 3246516 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 4242831 35375016 ~ 35395771 (-)

Expression


Co-expression Network