AMCG00021844 (eif3h)


Basic Information

Item Value
gene id AMCG00021844
gene name eif3h
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 32193277 ~ 32219473 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021844
ATGGAGATGATGCGAAGCTTGCGACATGTCAACATTGACCATCTTCACGTTGGTTGGTACCAGTCCACCTACTATGGTTCCTTTGTGAGCCGTGCCCTTTTGGATTCCCAGTTCAGCTACCAGCATGCCATTGAGGAGTCTGTGGTCCTCATTTACGACCCCATCAAGACGGCCCAGGGCTCTCTGTCATTGAAGGCATACAGGCTCACTCCCAAATTAATGGAGATTTGCAAGGAGAAGGACTTTACTCCTGAAGGGCTGAAAAAAGCCAACGTTGGCTTTGAGTGCATGTTTGAAGAAGTGCCAATTGTCATCAAGAATTCGCACCTCATCAATGTCCTGATGtgggagctggaggagaagtCGACCCTAGCGGATAAGCATGAACTTCTCAACCTATCTAGCAGCAATCACCTGGAAAAGAGCCTTCAGCTGCTTATGGACAGAGTGGATGACATGAGCCAGGATATAGTTAAATACAACACTTTCAGCAGGAATCTcagcaaacagcagcagcaaaaacaCCAGTATGTCCAAAGACGGCAGCAGGAGAATGTGCAGAGACAAAGTCGCGGGGAGCCGCCGTTGCCTGAGGAGGATATCAGCAAGATGTTCAAGCCCCCTCAGGCCCCACCTCGTATGGACACGCTCCTCATTGCAGGGCAGATCAACACCTACTGCCAGAACATCAAGGAGTTCACCTCTCAGAACCTGGGTAAACTCTTCATGGCGGAAGCTCTCCAAGGTCACAACAGTTAA

Function

symbol description
eif3h Enables deubiquitinase activity. Contributes to translation initiation factor activity. Involved in negative regulation of proteasomal ubiquitin-dependent protein catabolic process and translational initiation. Located in extracellular exosome and membrane. Part of eukaryotic translation initiation factor 3 complex. Implicated in breast cancer; prostate cancer; and prostate carcinoma. Biomarker of prostate cancer.

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit H isoform X1

GO: NA

KEGG:

id description
K03247 EIF3H; translation initiation factor 3 subunit H

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021844 True 759 mRNA 0.50 6 32193277 32219473

Neighbor

gene id symbol gene type direction distance location
AMCG00021850 NA coding upstream 47251 32138572 ~ 32146026 (+)
AMCG00021843 rad21,LOC108243945 coding upstream 100592 32082134 ~ 32092685 (+)
AMCG00021842 NA coding upstream 128230 32059116 ~ 32065047 (+)
AMCG00021840 LOC108430552,LOC106928852,LOC106964918 coding upstream 212249 31954587 ~ 31981028 (+)
AMCG00021841 LOC101464589,LOC102196503,LOC102793765,LOC106588504 coding upstream 322252 31870072 ~ 31871025 (+)
AMCG00021851 NA coding downstream 198828 32418301 ~ 32433938 (+)
AMCG00021852 NA coding downstream 280750 32500223 ~ 32508325 (+)
AMCG00021853 NA coding downstream 775751 32995224 ~ 33300230 (+)
AMCG00021857 csmd3 coding downstream 1162946 33382419 ~ 33395225 (+)
AMCG00021854 csmd3 coding downstream 1215843 33435316 ~ 33453653 (+)
G88776 NA non-coding upstream 125870 32065283 ~ 32067407 (+)
G88771 NA non-coding upstream 164111 32028958 ~ 32029166 (+)
G88761 NA non-coding upstream 204226 31988784 ~ 31989051 (+)
G88746 NA non-coding upstream 206747 31894467 ~ 31986530 (+)
G88743 NA non-coding upstream 333142 31859921 ~ 31860135 (+)
G88833 NA non-coding downstream 585845 32805318 ~ 32805877 (+)
G88838 NA non-coding downstream 657926 32877399 ~ 32877672 (+)
G88867 NA non-coding downstream 1491301 33710774 ~ 33711053 (+)
G88872 NA non-coding downstream 1541770 33761243 ~ 33761474 (+)
G88882 NA non-coding downstream 1625623 33845096 ~ 33845340 (+)
AMCG00021802 kdm1b other upstream 1724357 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 1785505 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 2807952 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 2917930 29264827 ~ 29275347 (+)
G88276 NA other upstream 3127938 29060887 ~ 29065339 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 2707080 34926553 ~ 35077090 (+)
G89142 NA other downstream 2991660 35211133 ~ 35263537 (+)
G89299 NA other downstream 3745098 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 4430759 36650232 ~ 36659244 (+)
G89578 NA other downstream 5901784 38121257 ~ 38151049 (+)

Expression


Co-expression Network