AMCG00021846


Basic Information

Item Value
gene id AMCG00021846
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 32047110 ~ 32047584 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021846
CTGTCTCTAAACGTATATTCACacgctgtctgtctgtcatctTTCCTCAGCCTCAGGTGTGAGAAGAGGGTCCTGGAGGCGGTGCGAGACGAGCCCTTCCTGGTCACGTTCTATGGCTCCTTCCAGACGGCACATCAGGTGTGCCTCGTCATGGATTTCACTCCAGGGGGAGACCTGCTGGACAGACACTGCTACGTCAAGCTAAGTGACTTTAGCCTGTGCAAGGTATGGATGGGACTGAACGACCGCACTAGCACCATGTGTGGGACGCCCCAGTTTGTGTCACCTGAGCTACTGACGGAGACGTCCTTCACCCGGGCCATAGATTGGTGGGCCGTGGGCGTCCTGCTCTACCAGATGCTGGTTGGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021846 True 372 mRNA 0.57 2 32047110 32047584

Neighbor

gene id symbol gene type direction distance location
AMCG00021847 NA coding downstream 9531 32031688 ~ 32037579 (-)
AMCG00021848 med30,LOC107706236,LOC107754270 coding downstream 28976 32011442 ~ 32018134 (-)
AMCG00021828 LOC107600623,LOC107666844,LOC107551188,LOC105905365,LOC107705775 coding downstream 696742 31310586 ~ 31350368 (-)
AMCG00021826 NA coding downstream 821729 31221983 ~ 31225381 (-)
AMCG00021831 NA coding downstream 938464 31093408 ~ 31108646 (-)
AMCG00021845 NA coding upstream 47941 32095525 ~ 32097519 (-)
AMCG00021861 NA coding upstream 1959075 34006659 ~ 34014890 (-)
AMCG00021860 LOC107748562 coding upstream 2132008 34179592 ~ 34189526 (-)
AMCG00021864 NA coding upstream 2195281 34242865 ~ 34249647 (-)
AMCG00021865 NA coding upstream 2204090 34251674 ~ 34260396 (-)
G88762 NA non-coding downstream 58060 31988774 ~ 31989050 (-)
G88742 NA non-coding downstream 187277 31859409 ~ 31859833 (-)
G88736 NA non-coding downstream 210871 31798752 ~ 31836239 (-)
G88643 NA non-coding downstream 1085014 30961703 ~ 30962096 (-)
G88562 NA non-coding downstream 1484310 30525746 ~ 30562800 (-)
G88795 NA non-coding upstream 47118 32094702 ~ 32094939 (-)
G88831 NA non-coding upstream 644687 32692271 ~ 32692496 (-)
G88866 NA non-coding upstream 1622883 33670467 ~ 33670919 (-)
G88871 NA non-coding upstream 1712688 33760272 ~ 33760620 (-)
G88873 NA non-coding upstream 1713658 33761242 ~ 33761474 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 914925 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 1158522 30877848 ~ 30888588 (-)
G88527 NA other downstream 1622498 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 2304302 29730077 ~ 29742808 (-)
G88288 ctdp1,LOC107745039,LOC107698650,LOC107748359,LOC107672848 other downstream 2975350 29069201 ~ 29071760 (-)
AMCG00021849 NA other upstream 15801 32063385 ~ 32069464 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 2212420 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 2299404 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 2331117 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 3327432 35375016 ~ 35395771 (-)

Expression


Co-expression Network