AMCG00021853


Basic Information

Item Value
gene id AMCG00021853
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 32995224 ~ 33300230 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021853
ATGGTGTTGCATTGCTTGCTGAAGAAGCCAGGAGAGAAAAGATTACGGCAAATTGCCTATAAAACAGAGTTGAGGCTGAAATCCCAGGATGGGATCTTAATCAAAAGGATCCTCACAGACTTCCAGATGGAGGAGAAGTACGATTACTTGGAGGTAGAAGGGTCTGAGCCACCAACAATATGGCTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021853 True 189 mRNA 0.44 5 32995224 33300230

Neighbor

gene id symbol gene type direction distance location
AMCG00021852 NA coding upstream 486899 32500223 ~ 32508325 (+)
AMCG00021851 NA coding upstream 561286 32418301 ~ 32433938 (+)
AMCG00021844 eif3h coding upstream 775751 32193277 ~ 32219473 (+)
AMCG00021850 NA coding upstream 849198 32138572 ~ 32146026 (+)
AMCG00021843 rad21,LOC108243945 coding upstream 902539 32082134 ~ 32092685 (+)
AMCG00021857 csmd3 coding downstream 82189 33382419 ~ 33395225 (+)
AMCG00021854 csmd3 coding downstream 135086 33435316 ~ 33453653 (+)
AMCG00021856 csmd3 coding downstream 174938 33475168 ~ 33537910 (+)
AMCG00021855 csmd3,LOC106570400 coding downstream 248366 33548596 ~ 33586500 (+)
AMCG00021858 NA coding downstream 510244 33810474 ~ 33822086 (+)
G88838 NA non-coding upstream 117552 32877399 ~ 32877672 (+)
G88833 NA non-coding upstream 189347 32805318 ~ 32805877 (+)
G88776 NA non-coding upstream 927817 32065283 ~ 32067407 (+)
G88771 NA non-coding upstream 966058 32028958 ~ 32029166 (+)
G88761 NA non-coding upstream 1006173 31988784 ~ 31989051 (+)
G88867 NA non-coding downstream 410544 33710774 ~ 33711053 (+)
G88872 NA non-coding downstream 461013 33761243 ~ 33761474 (+)
G88882 NA non-coding downstream 544866 33845096 ~ 33845340 (+)
G88884 NA non-coding downstream 611190 33911420 ~ 33911775 (+)
G88887 NA non-coding downstream 658365 33958595 ~ 33959180 (+)
AMCG00021802 kdm1b other upstream 2526304 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 2587452 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 3609899 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 3719877 29264827 ~ 29275347 (+)
G88276 NA other upstream 3929885 29060887 ~ 29065339 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 1626323 34926553 ~ 35077090 (+)
G89142 NA other downstream 1910903 35211133 ~ 35263537 (+)
G89299 NA other downstream 2664341 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 3350002 36650232 ~ 36659244 (+)
G89578 NA other downstream 4821027 38121257 ~ 38151049 (+)

Expression


Co-expression Network