AMCG00021861


Basic Information

Item Value
gene id AMCG00021861
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34006659 ~ 34014890 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021861
ATGGTGTTGTGGACAGCAGAGGAGCAGGGAGGCATTGGAGCAAATCAATACTATCAGCTTCACAAGGTAAACATCTCAAACTTTGACCTGGTCATGGAGTCTGACCTGGGCACCTTTTCCCCACTTGGCATTCAGTTTACTGGCAACAATGAATCCAAGGCCATCATGAAGGAGGTTATGAAGCTGCTGAAGCCTATTAATGCAACAGGGCTGGTCAATCACGGGGAGGGCACTGATATTAACATGTGGATGCAGGCTGGTGTACCAGAGATCATTGTTtaa

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004180 carboxypeptidase activity molecular_function

KEGG:

id description
K01302 CPQ; carboxypeptidase Q

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021861 True 282 mRNA 0.47 3 34006659 34014890

Neighbor

gene id symbol gene type direction distance location
AMCG00021845 NA coding downstream 1909140 32095525 ~ 32097519 (-)
AMCG00021846 NA coding downstream 1959075 32047110 ~ 32047584 (-)
AMCG00021847 NA coding downstream 1969080 32031688 ~ 32037579 (-)
AMCG00021848 med30,LOC107706236,LOC107754270 coding downstream 1988525 32011442 ~ 32018134 (-)
AMCG00021828 LOC107600623,LOC107666844,LOC107551188,LOC105905365,LOC107705775 coding downstream 2656291 31310586 ~ 31350368 (-)
AMCG00021860 LOC107748562 coding upstream 164702 34179592 ~ 34189526 (-)
AMCG00021864 NA coding upstream 227975 34242865 ~ 34249647 (-)
AMCG00021865 NA coding upstream 236784 34251674 ~ 34260396 (-)
AMCG00021863 LOC107751906 coding upstream 248925 34263815 ~ 34274711 (-)
AMCG00021866 NA coding upstream 312268 34327158 ~ 34348033 (-)
G88918 NA non-coding downstream 25831 33976080 ~ 33980828 (-)
G88883 NA non-coding downstream 161207 33845114 ~ 33845452 (-)
G88873 NA non-coding downstream 245185 33761242 ~ 33761474 (-)
G88871 NA non-coding downstream 246039 33760272 ~ 33760620 (-)
G88866 NA non-coding downstream 335740 33670467 ~ 33670919 (-)
G88939 NA non-coding upstream 162157 34177047 ~ 34177481 (-)
G88991 NA non-coding upstream 269494 34284384 ~ 34286302 (-)
G89003 NA non-coding upstream 329745 34344635 ~ 34345989 (-)
G89011 NA non-coding upstream 404870 34419760 ~ 34420279 (-)
G89130 NA non-coding upstream 1064683 35079573 ~ 35081173 (-)
AMCG00021849 NA other downstream 1937195 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 2874474 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 3118071 30877848 ~ 30888588 (-)
G88527 NA other downstream 3582047 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 4263851 29730077 ~ 29742808 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 245114 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 332098 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 363811 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 1360126 35375016 ~ 35395771 (-)
G89368 NA other upstream 1928862 35943752 ~ 35946984 (-)

Expression


Co-expression Network