AMCG00021863 (LOC107751906)


Basic Information

Item Value
gene id AMCG00021863
gene name LOC107751906
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34263815 ~ 34274711 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021863
GCTAGAGCTAAGCATGGGACTCGAAAATACTGCTGTTCCGGGTCTGCACTTCCTGGTGTAGATGTCGCCAGTAGATACGGCGGAAGTCGTCACGAACCCCACGGCATGCTGGTCTTATTTAATAAGAAGCTGGGGTACATGCCATTTTTCTACTGTGAAAGAGTAACAGATGCATCTCAGACTGCTCTATCCAGTGTGATCCCAGTGTTTGCAGTGATGAAATTTGACAAAGACGGAAATGTGACGTCATTTGagagaaaaaagacagaatTGTACCAGGAACTTTGTCTCCAAGCTCGGGATTTGCGATTCCAGCATCTCACAAGTATAACAACTCGAAACAACAGGATCATCATTCGAATGGAGTTTCTGAAGGCCGTGATCATGACAGATTGTCTTTTCATCCTGGATTTCCGAAATGTCAATCTGGACCAATGGCTTTTCAAGGAACTGGCTCCTCAGCTCGCTGGGGACGGGCAACTGGTCACCTATTCTCTGCCATTTGAGTTCAGAGCTATAGAGGCCATCCTCCAACACAGaTCACTAGTGGATCCCAAACTGCTGTCGGTGGATAGGAGTAAACTCCACGTGTTACTGCAGAACAGTAAGAACCTATCAGAGCTGGAGACCGACATTAAAGTGTTCAAAGAGAGTCTGCTGAAGATTTTGGATGAGGAGGAGTTAATAGATGAGCTGTGTCTCACCAAATGGACTGACCCTCAGGTgttTGAGGAGAGTAGCTTGGGAATAGACCATGCAGAGGAAATGGAATTGCTTCTGGAGAATTACTACAGACAAGCTGAGGATTTGGCAAATTTGGCACGAGAACTTAAAGTGCTCATTGATGACTCTGAAAGCGTTATCTTCATTAATTTGGATAGCCACCGAAACGTCATGATGCGTCTCAACCTACAGCTGACCATGGGCACCTTCTCTTTGTCTCTATTTGGACTGATCGGAGTTGCATTTGGTATGAATCTGGAGTCTTCACTTGAGGAGGATCCAAGGATTTTCTGGCTGTTCACAGGAATCATGTTTTTAGGAAGTGGTCTTATCTGGAGGCGTCTACTGTCATTCCTGGGCCGACATCTTGAGCCTCCATCTCCACCCCTGATTCCACCCATTTGGAAGAGGAGTCATCTTAACAGCTTGAGAGGGACAGACCTGAAAAGTGGACTGAGACAAGATACTTTAGCTTCTGTTAGAAACCCCCTAATGAATCAAAAGTAGCAGCTTATCAAAGCAGCAGGATGCAGACATATTATGAAAAATTACAGTCCCTAAACGTTGTTATATAGGTGTGACTGATTACAGTTAAAGGTAACTTTAACATTattatcaattacattaatttaaggAGTTTGCTTGCCATTTGTTTCTTACTTTTCAACAAATCTGCATTACtgtcaaatacacattttgtgatttttgaaattgttttatattggcGTGAGAATAAGCTTCTTATTAATATACTCAAGTatcttttaattactttttgttttcaccTATTTAACTAAACCAAAGAAAATGGGTTATGTTTTGGGCCCTGGTCTTGTTGGGTTTGTGATGAAGCCAATTGAACAGGTCAGAAgttgttttaatacatgtaatacaATGCTATTCacgtacattttttttgtgacCAAGTAGGTCCTATTTTATGTCCTATTGCGAAACACTGCCAAATAAgttaaatttattattttcctaacCTAAATACACCTTACATTTAGTATTGTAAGAATTTTGTGATACACTTCAAAATGCAGGTATAGTTGTTGCTATTATATGTAATGTCTTCCAATACTTTCCTTATGTTGTActtctttaaaaatacttattaaTTAATGGAAGGATTTATTTATCATTGTTATGAATGCCCTATTTTTCTGGGTACTGTAATTCATATTGTCAATGTTTGCAATAAATCACAGACTGTATGATAAAATGTGTGCCTATACGTATTGGAAAATCTGACATGTTTA

Function

NR:

description
PREDICTED: magnesium transporter MRS2 homolog, mitochondrial-like

GO: NA

KEGG:

id description
K16075 MRS2, MFM1; magnesium transporter

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021863 True 1988 mRNA 0.40 11 34263815 34274711

Neighbor

gene id symbol gene type direction distance location
AMCG00021865 NA coding downstream 3419 34251674 ~ 34260396 (-)
AMCG00021864 NA coding downstream 14168 34242865 ~ 34249647 (-)
AMCG00021860 LOC107748562 coding downstream 74289 34179592 ~ 34189526 (-)
AMCG00021861 NA coding downstream 248925 34006659 ~ 34014890 (-)
AMCG00021845 NA coding downstream 2166296 32095525 ~ 32097519 (-)
AMCG00021866 NA coding upstream 52447 34327158 ~ 34348033 (-)
AMCG00021870 NA coding upstream 470992 34745703 ~ 34757627 (-)
AMCG00021878 grina coding upstream 492141 34766852 ~ 34784712 (-)
AMCG00021879 NA coding upstream 515557 34790268 ~ 34809602 (-)
AMCG00021877 vps28,LOC107696523,LOC107592928 coding upstream 536445 34811156 ~ 34820379 (-)
G88939 NA non-coding downstream 86334 34177047 ~ 34177481 (-)
G88918 NA non-coding downstream 282987 33976080 ~ 33980828 (-)
G88883 NA non-coding downstream 418363 33845114 ~ 33845452 (-)
G88873 NA non-coding downstream 502341 33761242 ~ 33761474 (-)
G88871 NA non-coding downstream 503195 33760272 ~ 33760620 (-)
G88991 NA non-coding upstream 9673 34284384 ~ 34286302 (-)
G89003 NA non-coding upstream 69924 34344635 ~ 34345989 (-)
G89011 NA non-coding upstream 145049 34419760 ~ 34420279 (-)
G89130 NA non-coding upstream 804862 35079573 ~ 35081173 (-)
G89212 NA non-coding upstream 1095395 35370106 ~ 35370480 (-)
AMCG00021849 NA other downstream 2194351 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 3131630 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 3375227 30877848 ~ 30888588 (-)
G88527 NA other downstream 3839203 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 4521007 29730077 ~ 29742808 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 72277 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 103990 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 1100305 35375016 ~ 35395771 (-)
G89368 NA other upstream 1669041 35943752 ~ 35946984 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 2140168 36414879 ~ 36438350 (-)

Expression


Co-expression Network