AMCG00021865


Basic Information

Item Value
gene id AMCG00021865
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34251674 ~ 34260396 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021865
GTCCATTCGCTACTGTGCGTCCTAAAAACTGCTGTCCTGGAAGAGATTACTGGTCGCTGGCAGATCCTCTCTCTGTTCACTTACTTCTTGTCAAGGTTCAGGCATGGCTGGTACAggacagagccctgatctcaaatTCCAGCAAGATAGAGTGATGGCAGTGGATGAATGGCATGATCGCTGGAAAGAGGGAAGGATTGGTTTTCATCAGCAAGATGTGCACAAGTTGTTGGAAAAACACCTTGACACAGTTGTAAATGGCAGGAAAGGAGTTCGTTTTCTCTTCCCCCTTTGTGGAAAAGCTATAGACATGAAAtgGTTAGCAGATATGGGCCACACTGTTGTAGGAGTGGAGATAAGTGAGATTGCAATACAGCACTTCTTTTCTGAACAGAACCTAACCTACACTGAGGAGTTAGTTCCAGCTATACCAGGAGCCAAGCTCTCCACAGCAGGGAAATTTGGAGGGATCTGGGACCGAGGATCCCTAGTGGCTATCAATCCCTGTGACAGGCAACGCTATGCCACGTTAATCATTTCTTTAATGGACAAAGACTGCAGATACCTCCTGGATACATTTCTGTACAACCCCAGTTTGTATAAAGGTCCACCATTTTTGGTGCCAGATGAGAATGTGAATGATTTATTTGGCAAAGCATGCAACATTCAGCCACTTGAGTCTACTGATGCtttcacagagaaacagaggagCTGGGGCATAGATTATCTAACAGAGAAAGTGCATCTTCTCACTTTGAAGCAGAAATGAACTTTGAAGAAACTCAGTTAAAGGTCTGTGGTTTTGTGTGGGTTGTCATCTATTCCCCATGACTCTTTAAACTATGGGCCCCTTTATGAACCTGTCAGAAGACCTTAAATCATTTCTGAGCATCCTCCCTCCAAATGTAGGCATGGTTACTTTAATCTCAGTTCCCACTTAAATGTTCatgctttttttgcttttacaaaatattgtgttctgggtcataatatttaaatatatgcaaatgtattaagaTAAACATATTGAGTAACTTGTAGGGGGATACCTGTAGTGTCACTCACTCTGTGTAGGCCAGTAAGTCGTAAATTCAGTTGGGAAAGCTGTTCCATATATAGTTTTGTAAGACaccttttaatatttgtatgttccACCCTGGaacacaatatttataaaaagcaacaagatatgaaaacataaataaatggagaGGTATTGATGTTCAAATACACTTGTTTATAAATTACTTACTTCTCACATAAATGTCAAAGTTTAAGTTATTTGTAATAGTGTGTAttgcagattgttttgtttctgaactAGGAATGCTTTtggattttaataaatcatataatctcagaaattattttaaaacctttttcttctcattaaACCACTGAAAAGGAATTACTAAAATCAGGACAGCACAAAAGGAATCTTTCCATAAACGTGTTTCTAATATTTGTAATGGCTCAAGTTACAATAAAATTGTCTTTATAgaaa

Function

GO: NA

KEGG:

id description
K00569 TPMT, tpmT; thiopurine S-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021865 True 1504 mRNA 0.38 8 34251674 34260396

Neighbor

gene id symbol gene type direction distance location
AMCG00021864 NA coding downstream 2027 34242865 ~ 34249647 (-)
AMCG00021860 LOC107748562 coding downstream 62148 34179592 ~ 34189526 (-)
AMCG00021861 NA coding downstream 236784 34006659 ~ 34014890 (-)
AMCG00021845 NA coding downstream 2154155 32095525 ~ 32097519 (-)
AMCG00021846 NA coding downstream 2204090 32047110 ~ 32047584 (-)
AMCG00021863 LOC107751906 coding upstream 3419 34263815 ~ 34274711 (-)
AMCG00021866 NA coding upstream 66762 34327158 ~ 34348033 (-)
AMCG00021870 NA coding upstream 485307 34745703 ~ 34757627 (-)
AMCG00021878 grina coding upstream 506456 34766852 ~ 34784712 (-)
AMCG00021879 NA coding upstream 529872 34790268 ~ 34809602 (-)
G88939 NA non-coding downstream 74193 34177047 ~ 34177481 (-)
G88918 NA non-coding downstream 270846 33976080 ~ 33980828 (-)
G88883 NA non-coding downstream 406222 33845114 ~ 33845452 (-)
G88873 NA non-coding downstream 490200 33761242 ~ 33761474 (-)
G88871 NA non-coding downstream 491054 33760272 ~ 33760620 (-)
G88991 NA non-coding upstream 23988 34284384 ~ 34286302 (-)
G89003 NA non-coding upstream 84239 34344635 ~ 34345989 (-)
G89011 NA non-coding upstream 159364 34419760 ~ 34420279 (-)
G89130 NA non-coding upstream 819177 35079573 ~ 35081173 (-)
G89212 NA non-coding upstream 1109710 35370106 ~ 35370480 (-)
AMCG00021849 NA other downstream 2182210 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 3119489 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 3363086 30877848 ~ 30888588 (-)
G88527 NA other downstream 3827062 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 4508866 29730077 ~ 29742808 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 86592 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 118305 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 1114620 35375016 ~ 35395771 (-)
G89368 NA other upstream 1683356 35943752 ~ 35946984 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 2154483 36414879 ~ 36438350 (-)

Expression


Co-expression Network