AMCG00021873 (fhod3)


Basic Information

Item Value
gene id AMCG00021873
gene name fhod3
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34625048 ~ 34678756 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021873
GTGGTTTCACCAGTTCCTGTGATAGACAACGTAGAACCAGCTGATAGCGCATGCTCGCCTTGTAAATACGTAGTCAGCTTCATCCCAACTTCTACAGAAGAGATGACTCCAGAGGCCACTCCGGCAAAGAGCCCACTGACCTCGGCCACTGTCACCCCTGACTGCCCCGAATCATCTTACCTCTCTGTCTCACCACAACCCTCCATCCTCGCCTCATTGTTAGCCAGCCGGAAGTCACCCATCAACCCAACCACCACCCCACCCAGATCCTGTTCCCAGGGTTCTTCGGCAAACATCACCCCAGCTGTGTCTCCGACAATAGAGAAGCTGCCCTACCTCCCTCATTCCCCATTCCATCTCTTCTCATATGACTTTGATGAGCCACCTCCTTCAGTGGCTAAAGACACAGAGACTGAAGCAATGCAGTGCCTCAGGCCGGCTCTTGGGGGATTGCTGACCTCTTCCTACCGACAGCACCAGGAATCACTGGCAGCCGAACGAGAGCGGCGGcgacaggagagagaggagaggttaCTGCGGATAGAACGCGAGGAGAGGAACAGATTCAATCGGGACTATGTGGATAAAAGGGAAGAACAGAGACATGCCAGAGAGGAAAGGTACAAACACGTGGAGAGGGTCGCCGCAGAGGAGTACGAGAAGGAGCGGACCCGGGTGCCACCGCGGGGGCGCAGCGAGCTCACCCTCAGCCTGAGCCCGCACTCCTCGTCGCCTGTGCCCAGGTGCGCCACCCCGTCCTCTGCCGAGCCCCAGGAGGAGCCCGAGACCCCGGCCACACCCTGCCCGCCTCCCGCTGATGCGCAAGTATTAATCAGTGAACCAGAAACAGAACCAGAACAGGAGGAAGAATCCAAGACAGAGCCAGCCCTCGAATCCGCTCCAGAGTCAGAAGCGGAAACCAAGTCCTCGGTGGAGAGACAGGTAGCGGAACTCGAGGCGGAAAAGGAACCGGAACCAGAGGCCCAGTCGGAGGAGGCGGAGTCGCAGGGTGTGGCAGGACCAGAGGCGGGAGTGGAGCAGGGGGCCGAGCGAGACACCGAGGACAGCGCCCTCCTGAGCGAGAAGGAGAGGCAGAATGAGGAAGTGAACGAGAAGGACAACTGCTCTGCTTCTAGCATCTCCTCCGCCAGCAGCACtttagagagagaggagagagaggaaaaactAACCAGCGACAATGAGACGGGTCAGTGGGCGCAGTGCATTAAGGATGTGGATGTGAACGAGCAGTGCAGCAAGATCCTCAACAGCAAGCTCTTCATGTTGGACATGTTGTATGCCCAGAACAAGAAGCCgcaggatgaggaggaggaggaagaggaagaagaggagaaggagaaagacaaagaggagaaggaggagggcgAGGAGTCAGTGGCCAGCTTGGCCAGCCGAATCTCCATCCTCCAAGCCAACAAGCAGGCCTGTGAGGAGAATGTCAAGAAGATGGACATGGAGCAACTGGACAACCAGGGCAGTGTAAAAGCCTTTGCGGAGAAGTTTAACAGTGGGGAGCTGGTCAAGGGCCTGTCAGCAGGGGACAGCGACCATGGCGACAAGCCGCAAGAGAAAGCCGCCCCACCTCCCAAGAAGGAGTCGGACTACATTTGGGATCAGCTGATGGCCAGCCCTCGTGAGCTGAAAATCAAGGACATGGACTTTACAGACTTGGAGGACGAGGATGACATAGACATCTTGGACATGGATAGTGTTATGGGCACCCGGGAGACGATccttcctccacctccccctcctccttcttTCATGGCCttacctccccctccccctctttttgcctgcccccccccaccccccatgccTGTCTCTAtgctgccccctccccctcccttcaGTGCCGCCCAACACATGGGCTCCCCACAGTTAGCACGAGGTGAGCCCTTGTtccagaaaaagaagaagaccATCAGGCTATTCTGGAACGAGGTACGACCCATGGACTGGCAATACAAAAACCATAAATGCTGCAAAGACTCACTGTGGAATAAATTGGACCCCATCAAATTGGACACTTCCAAGCTTGAGCACCTTTTTGAAACAAAGTCCAAGGAATTGCCAGTCACTAAGAAAACCGCAGCTGACGGCAAGCGTCAAGAAATCATTGTGCTTGACTCCAAAAGAAGTAATGCCATTAACATAGGTCTGACAGTGCTGCCCCCACCAAGGACAATCAAAACTGCTATTCTCAACTTCGATGAGTATGCCTTAAATAAAGAAGGAATTGAGAAAATCCTAACAATGATCCCTACCGAAGAGGAGAAACAGAAGATTCAGGAAGCCCAGCTGGCCAACCCAGACATTCCCCTGGGCAGCGCAGAACAATTCCTGCTCACCTTGTCCTCCATCAGTGAGCTGTCAGCTCGTCTGCAACTGTGGGCCTTTAAAATGGACTACGAGCTCATAGAGAAGGAGGTAGCTGAGCCCCTCCAAGACTTGAAAGAAGGGATGGATCAGCTAGAAAACAACAAGACATTAAGATACATACTATCCACATTGCTCACGATTGGCAACTTTCTAAATGGATCAAACGCCAAAGGATTTGAGTTGAGCTACTTGGAAAAGGTTCCTGAGGTGAAGGACACAGTGCACAAGCAGTCTCTCCTGCATCATGCTTGCAGCATTGTGGTGGAGAAGTTCCCAGATAGCACTGACCTCTACTCTGAGATCGGGGCCATCACTAGATCAGCCAAGGTTGACTTCGATCAGCTGCAAGAAAACCTGAGTCAAATGGAAAGGCGGTGCAAAGCTTCTTGGGATCACCTGAAAGTTATTGCAAAACATGAGATGAAACCAGCTCTCAAGCAGAAAATGTCAGAGTTCCTCAAAGACTGTGCTGAGAGGATCATCATTTTGAAGATCGTGCACAGGAGAATAATCAATAGGTTTCATGCGTTTCTGCTGTTCCTCGGCCACCCTTCGTATGCCATCCGAGACGTGAACATCTACAAGTTCTGCAAAATCGTCAGCGAGTTTGCCCTGGAATACCGCACCACGCGAGAGAGGGTGCTTCAGCAGAAGCAGAAACGAGCCAATCACCGTGAGAGGAACAAGACCAGAGGCAAAATGATCACAGATACGGATGATGAAGAGGACAGTGAGACAGGGAAGTTCTCCAGCACCCCAGCCAGCAGCCAGAACCAGCCTCAGGGATTGCAGTACGCGGAGGATGCAGCCGAGCACGAAAACATGAAAGCCGTTCTGAGGAGCAGCCTGCAAGCCGGGGAGAGCAGCAGTTCTGTGGTGCCGGGGGTCCGCACTCGAACACGCGCCAACAGGGGTCGCATTGGTTCCTGGAATACAATGAATGATGACTCACCCAACGCTACGGATGACGCTGCTGACGAAATCATGGATCGCATTGTGAAGTCTGCGACACAAGTGCCAAGTCAGCGTGCTGTACccagggagaggaagaggtCACGGGCAAACAGGAAATCATTGCGGAGAACACTAAAGAGTGGCCTGACGCCAGAGGAGGCCAAAGCACTGGGACTGATTAGCACCTCTGAAATGCAGGTGTGACAAGACTTCCAGCAGCCTAGAGTGTAaaagcacaaaaagaaaaagagaaacgaAAACGGCACCTGGGTCAATCGTCTCCGTGGCAACAACTTCCAGCTGGCTGCCATTCACACCCACTCCTGACAATCCCATCACCTCTGAGCTCCTTTGTGTTGTATAACATTGTTAAGGAGAAAGAGCAAAAGAAACAGACCTTTTGGTAAAGGGTGTTGCAGCTCAGCCATAAAACTTTGAACAGTTACAGAAATCAGGattgtttttgaatattttagaagttaaaaaaacgtatggctttttttttttcttttttgtttatttaaactgaTGTGGTTAGTAGAGTTTCCCCTGTTGCGTTAATTGTTCCTGTATGAGCTGTGTTTGCGTTGGCCACTCATGTggctgtaatgtaatgtaactcaTGTAGCCTTGTCAGTGTGAAGAGACCAGGTTAGCTGCCTGTTAAGTTGCAGtctactgttttgttttatttttttaatcattattattttataaggcTTGCAGCATGAAGCAAGTGTTGTCCCATAGTGTGCAGCATAGGCAACAGCACAGTTAAACCTGAGAATATACTTGACACTGCACAAATGGTTTTCATTGTGAGTAAAATATAGAGGGATTTTGTACAGGCAGAACTGTTGGGAGTGTGTATTGCCAatgaatatacagctctgggaaaaaattaagagaccactgcaattttttcttaaatcagcatctctacatgtatggcagccgttccatttcattcatatttgtatttgggagaaatgttgtcagtagtttatagaatgaaacaaaaatgatcattttacccaaacacatgcCTGTAAATGGTAAAATCAgaaaaactgataattttgcagtggtctcttaattttttccagagctgtatattattcATATGACCCAGTAAACCTTGGGGACTGAACTAGAAGAATTATTTTGCCAGTTGATATCAAAATCATCACAGTGGTGGTGCAGAATGCAGCATGTGTTGCACCCTGAAAGTTTTtagacactttttttgtttttagagagGTTGTTTTTTTAGGCGAAAGTAAATGAGTGACCCATATCTCAATGTGTCCGAgaggaaaatatttgttttctgccGGAAAACAGAATGCTATAGCACAGCATGATTAGCTGATTAACTCCGGGTTGCTTTATCATGCTTTATTAGTccttatacagtactgtactttgTGAATGTTTCAACCATTGCCAGGTTGTACTGTTGTTGTGGTTAGAATGGACATagctgaaaaggaaaaacagtgtTTGGATATTGAGAGgaatataaaattaagaaatatacaaatgaGCAGGCTTCACATGCTCTGCAGCAGGAATTGAATTTAGTAACCTGTAAGTTAACTGTTAAAGTGCAGTGCAATAGAACAGAGTTTAGTTTCCTCTATGAGCTATTTTAAGGAAGAGATGGAAAAGTATCTTCAAAATGTCCTGTAATATCACAGAAGGCAGTAGCTGTGATTGACAAAGTTCAAAGTGTGTATACAGAATAGGTCTGTTAGCAGCCAACTGGATAGTATATtatcaaagaaaatgtgaaagtaCAGCTTTTTTATATAAGCTTTTTGTATCTGAGAAAGAGATGTGCACGTTGCTTCTTCAGCTAAGGATGGACAGGATGTCAGTATACATCACTGTCAGAAGTGTCGCAAAAGTATAGGGCATCTGCAACAGAAAAGAGAGGTAGAAGGAATTACAGAAATAGGGTAGGAAGTGGAAGTTAAAGAGAAAAGGCAAAAATTTCCTTGGTTTATACAGGCGGCTAACtaagaacattattattttttcaaaactgtaaGAAAGGGAAGTTAGAAAAGTAAAAGCACAATTATAAACTCAACAGGTTGAATAGTTAAGGATCCGCATCAGTACCTGCATGGCTCTCCATTCTACAGCAAGGGGCTTCATTTTGCTTTCTTGTTATGTCTCCTCTTCGTTAGGCAGAGCATGATTAagattacagattttttttttgtctagaTAGTCTTATGATAGCTGCATAACCTCTTCAAACAATCAAGTTGCATCCTTTAAAAAGAGAATCCTCTCGTTAAAGTTTTTTGTTAGCTTTATtacccacaaaacaaaaacgaaaaGGTCCCTTAATGtagaatatatatcatatatgctGTATTTCTCATTGTGTGCATCATACATTCAGTTAGACTGCTGAGCAATGCGTTCTTAACACTGACAATGCTTTTTTCATGTTAATCCTTAACCTGTAGGCACTAATGGACTGTATCAAGAAGCTCATCCTAATTTTTCATTCGCTGTTGGTCTCTTTCGTCTAAGTAAtgatatgttgtatttttaatctgaCACCCTGACATTGTCTGTATTCctgccagatttttttttcttcaaccaCAGACAGTATATCTTGGAATTGGGTTGTGTATAGGAGAAAGAGTGGAGTTTCATCAGATTTGCACACGCTTATGGTACGAAATCATCAGATTCTCTAACTGTGGTAAATATGAGACAGGGAAGGAAAGGTTATCTTACACAGAAATTGGAGATGTAACTCATGCTACAAATGGGATATGAATTAGTTTCTATGGaggccatttaaaaaatatagattaGCTCTTGACCCTTGCTAGTTTAAAACCGCTTAGTGTCCTTTACTGCCACTAGCACTAAAGACAAGGAAAAGGTCCAATATTTAAAGTGACTGTTTTGCAGTagaatcacacacactgacGAGCTTCAGATTCTTCAGTGCCTTTGGGGAAAGAAGTCTGTAATCATTCTGAATTATTtagggaaataaaatgtggatctaatgtaatgtaatgactaTGATACAATTGGGCAGCTATCATTTTCAGCAACacttcaaacaataaatatcTGCCCATTTCAGACCATTAAACTGTCTTTCACAAGGTAGATAACACcgtatttgatttatatttattttaagaaaacagacaAGTTTTTCACGTATTCTATTACATTCATTAGTGCCCGGCAAGGTGCTGAATCTTAAATTAGGCACATTATAACAAGTTACAACTGCTTAATGGACTATagtgtaaaatacatatatcttGAAGTTATCCACACTAATAATTTTCACAGCACAATGCCCGAGTTACTGAACTCCTTGCTCTTCGTAAACATGGCACTActatcattttgtattgttttctcatGGGGGATATACGGAAGACCTAGTATAATACTGCTAAAGCGCCAGTAGTACGTACTGTCCAGCACCTTATGTACCATCTGTAGCATGAATTtctatggagaaaaaaaattataatatcacTGTCTTTAGACACAGTTTTTTCTCAGTTGTAAGCTGAGcattgtaaaaaagaaaaaaaaatgtaaagttgaAATGGAAAAGTATTTAGAAGCAAAAGCAGAAGGacaaatgctgtaaaattgtgtaaatgtcacgctctgtgttgttttgtgtagaATAGTGTAATATAGGCTAAATAGCAATGTTATTCTGTGAATTGtaatttaagagaaaataagCCATGCATggtaaaaaaaagacaaaagacaaaaaaatatattatctacAGATGTGTTGCTTATTCTAGATAAGGGAGTTTCttatgtgttttgatttaatgtcaGTGAAATTGCTTCTgttatatgtacattttctccTATACTCCTTTTAGGATGATTGAATCAATCCACCCACCTTGAACTCATATTAAAGCCTTAGGAAGCATTTTTTTCCACTGCATATTTTTGCAAAAAGGAGACAAAATTGTTTCCCATAACTTCAGAATTGTTCTCATAATCTCTCCCTTTCAGTGCCATGCAATGTTAAAGTGAGAAATGGACAACACAAACTATTTAAACAGTGAATTTTCAGTTTTACACCCACCCC

Function

symbol description
fhod3 Predicted to enable actin filament binding activity. Predicted to be involved in actin cytoskeleton organization. Predicted to act upstream of or within negative regulation of actin filament polymerization. Predicted to be located in sarcomere. Predicted to be active in cytoplasm and cytoskeleton. Implicated in hypertrophic cardiomyopathy.

NR:

description
PREDICTED: FH1/FH2 domain-containing protein 3 isoform X2

GO: NA

KEGG:

id description
K23939 FHOD3, FHOS2; FH1/FH2 domain-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021873 True 7477 mRNA 0.44 16 34625048 34678756

Neighbor

gene id symbol gene type direction distance location
AMCG00021876 fhod3,LOC108413044,LOC102209662,LOC102799816 coding upstream 17427 34596916 ~ 34607621 (+)
AMCG00021869 NA coding upstream 211839 34406849 ~ 34413209 (+)
AMCG00021862 NA coding upstream 301126 34304949 ~ 34323922 (+)
AMCG00021859 clptm1l coding upstream 338729 34274666 ~ 34286319 (+)
AMCG00021858 NA coding upstream 802962 33810474 ~ 33822086 (+)
AMCG00021875 NA coding downstream 6259 34685015 ~ 34690667 (+)
AMCG00021874 rprd1a coding downstream 21092 34699848 ~ 34716167 (+)
AMCG00021872 NA coding downstream 39910 34718666 ~ 34736343 (+)
AMCG00021871 NA coding downstream 141584 34820340 ~ 34824676 (+)
AMCG00021883 NA coding downstream 302821 34981577 ~ 34983088 (+)
G89010 NA non-coding upstream 204991 34419791 ~ 34420057 (+)
G89006 NA non-coding upstream 237376 34387254 ~ 34387672 (+)
G88981 slc6a19b,LOC106570715,LOC107596751,LOC107743232,LOC107685553,LOC107662664 non-coding upstream 238846 34383959 ~ 34386202 (+)
G88980 NA non-coding upstream 251383 34369970 ~ 34373665 (+)
G88938 NA non-coding upstream 447570 34176954 ~ 34177478 (+)
G89222 NA non-coding downstream 727954 35406710 ~ 35406984 (+)
G89280 NA non-coding downstream 1182160 35860916 ~ 36195602 (+)
G89283 NA non-coding downstream 1213407 35892163 ~ 35893862 (+)
G89285 NA non-coding downstream 1221887 35900643 ~ 35901176 (+)
G89298 NA non-coding downstream 1285002 35963758 ~ 35970466 (+)
AMCG00021802 kdm1b other upstream 4156128 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 4217276 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 5239723 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 5349701 29264827 ~ 29275347 (+)
G88276 NA other upstream 5559709 29060887 ~ 29065339 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 247797 34926553 ~ 35077090 (+)
G89142 NA other downstream 532377 35211133 ~ 35263537 (+)
G89299 NA other downstream 1285815 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 1971476 36650232 ~ 36659244 (+)
G89578 NA other downstream 3442501 38121257 ~ 38151049 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010600 fhod3b coding NC_007127.7 CM002900.2 18608978 ~ 18652646 (-)