AMCG00021889


Basic Information

Item Value
gene id AMCG00021889
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35668304 ~ 35672523 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021889
CACAATGGCTGAATTTCAAGTGAAACGTGCTAACAAGTCACCTTTGAGGCCTCCCAGTGAACACTCTAAGGACAGAGCACATAAACACTTGTCTTCAGAAACTAATGGCACGGATGAAGGAGCCTCAGCTACTGAACTTTCTGCACTAGAAGATGCATTCAGGAAGTTTGCCATTCATGGTGATACCAGAGCGACAGGGAAGGAAATGCATGGGAAGAACTGGTCAAAACTGTGCAAAGACTGTGGCATCATAGATGGCAAGAACATAACACTCACCGATGTGGACATTGTCTTCAGCAAAGTAAaaaaaaaatccTGTCGAACAATCACATATGATCAGTTTATAGAAGCTCTGGGGGTACTCGCAAAGAAGCGTTTTAAAGACAAACCTGGAGAGGAAGCGGTCCAAGAAGTTTTTAAAATGGTTGAAGGAAAAACTCCTATAATATCTGGAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021889 True 457 mRNA 0.42 2 35668304 35672523

Neighbor

gene id symbol gene type direction distance location
AMCG00021885 kif13a coding downstream 316671 35311289 ~ 35351633 (-)
AMCG00021877 vps28,LOC107696523,LOC107592928 coding downstream 847925 34811156 ~ 34820379 (-)
AMCG00021879 NA coding downstream 858702 34790268 ~ 34809602 (-)
AMCG00021878 grina coding downstream 883592 34766852 ~ 34784712 (-)
AMCG00021870 NA coding downstream 910677 34745703 ~ 34757627 (-)
AMCG00021888 NA coding upstream 54896 35727419 ~ 35740510 (-)
AMCG00021890 NA coding upstream 125667 35798190 ~ 35799107 (-)
AMCG00021887 trip13,LOC106596102,LOC106590995 coding upstream 256068 35928591 ~ 35950291 (-)
AMCG00021891 NA coding upstream 354757 36027280 ~ 36030435 (-)
AMCG00021892 plekhg4b,LOC107729807 coding upstream 382451 36054974 ~ 36058550 (-)
G89247 NA non-coding downstream 213106 35454567 ~ 35455198 (-)
G89240 NA non-coding downstream 262964 35405057 ~ 35405340 (-)
G89212 NA non-coding downstream 297824 35370106 ~ 35370480 (-)
G89130 NA non-coding downstream 587131 35079573 ~ 35081173 (-)
G89011 NA non-coding downstream 1248025 34419760 ~ 34420279 (-)
G89264 NA non-coding upstream 38940 35711463 ~ 35711716 (-)
G89272 LOC101154678 non-coding upstream 144843 35817366 ~ 35817621 (-)
G89359 NA non-coding upstream 179513 35852036 ~ 35893714 (-)
G89373 NA non-coding upstream 294596 35967119 ~ 35985261 (-)
G89428 NA non-coding upstream 825671 36498194 ~ 36501828 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 272533 35375016 ~ 35395771 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other downstream 1280294 34378701 ~ 34388010 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other downstream 1288009 34346988 ~ 34380295 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other downstream 1311397 34260004 ~ 34356907 (-)
AMCG00021849 NA other downstream 3598840 32063385 ~ 32069464 (-)
G89368 NA other upstream 271229 35943752 ~ 35946984 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 742356 36414879 ~ 36438350 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other upstream 851986 36524509 ~ 36537718 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other upstream 1004583 36677106 ~ 36687642 (-)
G89598 NA other upstream 2588864 38261387 ~ 38283855 (-)

Expression


Co-expression Network