AMCG00021890


Basic Information

Item Value
gene id AMCG00021890
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35798190 ~ 35799107 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021890
ATGGCTAACAACCAGGGGATCAAAGATTGCTCGCTTTTTACTCACTCGCACAAGTCTGCCAAcactagaaaaaataaagattccTCTCTGGGCCTGGGAGAGGCGTCTCAGACTGCAGCCGCGGCCGCCATTGAAGCAGCACCCGCGGTGCCCGCAGCCTTTGGCTGCTACCAGAAATTCTGTCCCAAGTTAAAATCTCTGAGCTCCAGGTTTGACGCTAAATTTGAGGTGTTCGACGGTCGTCTAAATGTTATAGTGAACTCAGTTTCTATTCCGGAAAACTCGCTGACTGAGATCGTCCAGAGAATCAATGTGCTGGAAGCGCGCACTGAAGCCGCGGAAGAGAGAATCGCTGGTGTGGAATCTGCGTTGCCAGCAAACGAGCTGCAGATAAACTCTCTCAAGGACAGTGTGGCTCAGCTAGAGGAGAAACTGGACAATATTGAAAACCGGGCCAGACGCAAAAACATTAGAATCGTGGGGCTGGCTGAAGGTGAGGAGGGGTCGGGcccattgtttaaatatttgcaaaacatgCTGCCTGTCTGGCTCGATCTGCCCCCGTACCAGCCATTTGAAATTGAGAGGGCGCACAGATCCTTAGGACAGAGACCGAGAGCTAACCAGAGACCGAGAAGCATCGTAGTTCACTTTCTGAGATACCTTGACAAGGAGGCTATTCTGAATGCCTTCAGGATTAAACGTGAGGTGACCTGTCCGCGGAGGTGCTGCGCAAGAGGAGAGATCTGGCCGCGGAGAGAGAAGCTCACCGATCTCAGACTCTTCAGGGGTTTTGCCTATCCAGCTAAACTTCGCATTCTGTACAAGGGGAGGATTAAAATTTTTGAAACGTCAGCCATGGCCACCAGGTTTTTAGAGAGGGAGTTGGAAAGCTGTCCTGTGGATCCCCCGGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021890 True 918 mRNA 0.51 1 35798190 35799107

Neighbor

gene id symbol gene type direction distance location
AMCG00021888 NA coding downstream 57680 35727419 ~ 35740510 (-)
AMCG00021889 NA coding downstream 125667 35668304 ~ 35672523 (-)
AMCG00021885 kif13a coding downstream 446557 35311289 ~ 35351633 (-)
AMCG00021877 vps28,LOC107696523,LOC107592928 coding downstream 977811 34811156 ~ 34820379 (-)
AMCG00021879 NA coding downstream 988588 34790268 ~ 34809602 (-)
AMCG00021887 trip13,LOC106596102,LOC106590995 coding upstream 129484 35928591 ~ 35950291 (-)
AMCG00021891 NA coding upstream 228173 36027280 ~ 36030435 (-)
AMCG00021892 plekhg4b,LOC107729807 coding upstream 255867 36054974 ~ 36058550 (-)
AMCG00021898 NA coding upstream 823424 36622531 ~ 36625236 (-)
AMCG00021902 LOC108435486,LOC106605067 coding upstream 1037321 36836428 ~ 36845633 (-)
G89264 NA non-coding downstream 86474 35711463 ~ 35711716 (-)
G89247 NA non-coding downstream 342992 35454567 ~ 35455198 (-)
G89240 NA non-coding downstream 392850 35405057 ~ 35405340 (-)
G89212 NA non-coding downstream 427710 35370106 ~ 35370480 (-)
G89130 NA non-coding downstream 717017 35079573 ~ 35081173 (-)
G89272 LOC101154678 non-coding upstream 18259 35817366 ~ 35817621 (-)
G89359 NA non-coding upstream 52929 35852036 ~ 35893714 (-)
G89373 NA non-coding upstream 168012 35967119 ~ 35985261 (-)
G89428 NA non-coding upstream 699087 36498194 ~ 36501828 (-)
G89431 NA non-coding upstream 712492 36511599 ~ 36511931 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 402419 35375016 ~ 35395771 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other downstream 1410180 34378701 ~ 34388010 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other downstream 1417895 34346988 ~ 34380295 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other downstream 1441283 34260004 ~ 34356907 (-)
AMCG00021849 NA other downstream 3728726 32063385 ~ 32069464 (-)
G89368 NA other upstream 144645 35943752 ~ 35946984 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other upstream 615772 36414879 ~ 36438350 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other upstream 725402 36524509 ~ 36537718 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other upstream 877999 36677106 ~ 36687642 (-)
G89598 NA other upstream 2462280 38261387 ~ 38283855 (-)

Expression


Co-expression Network