AMCG00021898


Basic Information

Item Value
gene id AMCG00021898
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 36622531 ~ 36625236 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021898
ATGGCGAAAGCCTTGTATGACAATGTTCCAGAGTCTCCAGAAGAACTGGCATTCCGCAAGGGAGACATCTTGACTGTCATCGAGCAGAATACTGGAGGCCTGGAAGGATGGTGGTTGTGCTCCTTGCATGGCCGGCAAGGGATTGCACCTGGCAACCGTTTGAAGCTGCTGATTGGACCCATGTTTGATGGACAGTCCCCAAGCCAACAGCAACAATTTGAGTCAACCACATCCCAATCCTATCAGAAGCCTGGCTACCCAGCGACAGCTATTCAGAATTCCACATCAAATGATCCCCTTTACCAAGTGCCTCCCTCTCACCAGAACCAGCAAGGCACCTATCAAGTTCCCCCAAGCCACACTTCCCTGTGCCAGGATGTATACCAAGTGCCCCCATCTCTGCAGAGGAGTCCCTGGGCTGCAGAAGGCATGCCCAACAAGGGGTGTGAAACATCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021898 True 459 mRNA 0.53 2 36622531 36625236

Neighbor

gene id symbol gene type direction distance location
AMCG00021892 plekhg4b,LOC107729807 coding downstream 563981 36054974 ~ 36058550 (-)
AMCG00021891 NA coding downstream 592096 36027280 ~ 36030435 (-)
AMCG00021887 trip13,LOC106596102,LOC106590995 coding downstream 672240 35928591 ~ 35950291 (-)
AMCG00021890 NA coding downstream 823424 35798190 ~ 35799107 (-)
AMCG00021888 NA coding downstream 882021 35727419 ~ 35740510 (-)
AMCG00021902 LOC108435486,LOC106605067 coding upstream 211192 36836428 ~ 36845633 (-)
AMCG00021901 NA coding upstream 242607 36867843 ~ 36874210 (-)
AMCG00021903 atp9b coding upstream 318797 36944033 ~ 36975116 (-)
AMCG00021904 NA coding upstream 367615 36992851 ~ 36999640 (-)
AMCG00021905 NA coding upstream 465962 37091198 ~ 37171379 (-)
G89431 NA non-coding downstream 110600 36511599 ~ 36511931 (-)
G89428 NA non-coding downstream 120703 36498194 ~ 36501828 (-)
G89373 NA non-coding downstream 637270 35967119 ~ 35985261 (-)
G89359 NA non-coding downstream 728817 35852036 ~ 35893714 (-)
G89272 LOC101154678 non-coding downstream 804910 35817366 ~ 35817621 (-)
G89539 NA non-coding upstream 633307 37258543 ~ 37258818 (-)
G89549 NA non-coding upstream 841545 37466781 ~ 37467591 (-)
G89553 NA non-coding upstream 939738 37564974 ~ 37565215 (-)
G89559 NA non-coding upstream 989161 37614397 ~ 37614596 (-)
G89562 NA non-coding upstream 1135581 37760817 ~ 37761021 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 84813 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 184181 36414879 ~ 36438350 (-)
G89368 NA other downstream 675547 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 1226760 35375016 ~ 35395771 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other downstream 2234521 34378701 ~ 34388010 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other upstream 51870 36677106 ~ 36687642 (-)
G89598 NA other upstream 1636151 38261387 ~ 38283855 (-)
G89611 NA other upstream 1770335 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 2630643 39255879 ~ 39276056 (-)
G89765 NA other upstream 2860597 39485833 ~ 39486288 (-)

Expression


Co-expression Network