AMCG00021908


Basic Information

Item Value
gene id AMCG00021908
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38238138 ~ 38245037 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021908
gcCAAGGGAGTTCCCTTGTTTCCCTGTTTGGATTGCAGCTGTGTGTTCAAAAAACTTGGCAGTCTTAATGCACACATTAGCAAGATGCACATTTCCATCATAGAAGCTCCACAGAATTCTCAGAGAAAGTCAAACCACCTATATCCTCTTCCAATTGTACTTCATAACAGGGTAAGTATGCACGCAGACTTCACAGATGTTTCTCTCTTCTCTGAGCAGCAGCATGATGGAACAGTTTCAGGGCACCAAGGTCCTGGGACAGAGGGCACAGAAGGTGTGACAGATGTCATCCAGCAGCTCCTGGAACTGTCTGAGCAGGTTACGGGAGAGAACGCACAGGCTGCACAGCCAGTGCAGGCCATTGGTATAGAAGCAGGGATCAACCAGGACATCTTACAGCAAGCCTTGGAGAACAGTGGCCTGAGTGCCATACCAGTTCAATCCCATGCCCAGAACACTGCAGTAGCCAGGGCTTCTGGAACACAGAGCCAGGCCCAGGAAAACCCTCTATGCCCCCCTGCTTCTGACCAACTGGACACCAGTAAGGAGCCCAGCCCAGACAAAGTcatcaggaaagaaaagaaaagtgtttaCAAAAAGCCCATGCAAATGCCAgGTTCCATTCGTGAAGAAAATGGTATTAGGTGGCACGTGTGTCCTTACTGCTCCAAGGAATTCAAGAAGCCTAGCGACCTGGTGCGGCACATCCGCATTCACACACACGAGAAGCCTTTCAAGTGCAAGCAGTGCTTCCGTGCCTTCGCTGTCAAGAGCACACTCACAGCTCACATGAAGACCCACACTGGCATCAAGGCCTTCAAATGCCAGTACTGCATGAAGTGCTTCTCCACGTCCGGCAGCATGAAGGTCCACATGCGTCTTCATACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021908 True 888 mRNA 0.50 4 38238138 38245037

Neighbor

gene id symbol gene type direction distance location
AMCG00021909 NA coding downstream 13534 38180080 ~ 38224604 (-)
AMCG00021907 galr1,LOC107373077,LOC102797365 coding downstream 279605 37957755 ~ 37958533 (-)
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding downstream 1003297 37212616 ~ 37234841 (-)
AMCG00021905 NA coding downstream 1066759 37091198 ~ 37171379 (-)
AMCG00021904 NA coding downstream 1238498 36992851 ~ 36999640 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding upstream 574374 38819411 ~ 38826295 (-)
AMCG00021921 NA coding upstream 693570 38938607 ~ 38945501 (-)
AMCG00021920 znf407,LOC106583495,LOC106605077 coding upstream 799748 39044785 ~ 39052673 (-)
AMCG00021919 NA coding upstream 945861 39190898 ~ 39192682 (-)
AMCG00021917 NA coding upstream 963978 39209015 ~ 39234436 (-)
G89588 NA non-coding downstream 83017 38154760 ~ 38155121 (-)
G89587 NA non-coding downstream 84625 38153228 ~ 38153513 (-)
G89584 NA non-coding downstream 87088 38135260 ~ 38151050 (-)
G89570 NA non-coding downstream 257724 37980089 ~ 37980414 (-)
G89567 NA non-coding downstream 295458 37942347 ~ 37942680 (-)
G89609 NA non-coding upstream 104186 38349223 ~ 38349555 (-)
G89612 NA non-coding upstream 167010 38412047 ~ 38414262 (-)
G89617 NA non-coding upstream 176696 38421733 ~ 38422676 (-)
G89618 NA non-coding upstream 177663 38422700 ~ 38425440 (-)
G89625 NA non-coding upstream 246298 38491335 ~ 38491585 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 1550496 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 1700420 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 1799788 36414879 ~ 36438350 (-)
G89368 NA other downstream 2291154 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 2842367 35375016 ~ 35395771 (-)
G89598 NA other upstream 16350 38261387 ~ 38283855 (-)
G89611 NA other upstream 150534 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 1010842 39255879 ~ 39276056 (-)
G89765 NA other upstream 1240796 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 1241860 39486897 ~ 39548802 (-)

Expression


Co-expression Network