AMCG00021909


Basic Information

Item Value
gene id AMCG00021909
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38180080 ~ 38224604 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021909
GTGTCCGACCCTTCCCATGCCCCCACTGTGAGAAGATCTTCCGTACCTCAGGACACAGAAAAACCCACATAGCCTCCCACTTCAAGAGCATGCAGATGAAGAAGCAGAAATACCCCCGAAAACCCCAGAAAGTCAGAGTAGTGAAGAACAATCTCCCAATGCCAGACATCCCTCTTCAGGAGCCCATCCTTATCACAGACTTGGgtcttatacaaaaccaaaacccTCGAGGCAGCCTCTCCTTACAACAATATTTAGACATCATTGACAATGACAGGCCTTACAAATGTCCCTATTGCAGTAAAGCATACAAGAAATCCAGTCATCTTAAGCAGCATGTCAGATCACACACAGGAGAGCGGCCATACAAGTGCCTTCAGTGCAGTAAGGGGTTTGCTTCCTCAGGGGTTCTCAAGGCCCACATTCGCACTCATTCCGGACTGAAAGCCTACAAATGCTTGATCTGTGACAGCACCTTCACCACAAGTGGCAGCCTGAGACGTCACATGACCACCCACAGCGACCTTCGACCCTACATGTGTCCTTACTGCCAGAAGACATTCAAGTCCTCCCCaaactgcagaaaacacatgaaaaccCATAAGTACGAGCTAGCCCAACAACtccagcaacagcagcagcagcagccaccaTCCCTGGATGACCCCATGGGCGCCTCAGCGGTCACCACAGAGATGCAGGTGGAAATTGAAGGGGATGAACTCCAGCAGCCCCCCACTGTCAGCACAGAGCAGCAGGCTATGCTGGGTCTTAGCCAGCCGCAGGTTGTAGGAACCCAGCAGACGGAGCTGGAGCAACAGCTGAGTGACCAACCACTGGTGCAGGAAGGATTTACAATAGCGGATGGGTTCAATCAGCAGCCACAGTTCTCCACAGTCCAGCAGTTACAGGATTCAAGCACACTGGAGTCTCAAGCGCTGTCATCCAGTTATCATCAACAGAACTTGCTACAAGTCTCCAGTGCTGAGGTGACCAACGGACAGACTTCCAGGAAGATAATGATGATCATAACAGGAGGTCCTACAGGTGTAAAGGCTTTCAAATGCAATGTCTGTGATGCTTCTTTCACCACCAATGGTAGCCTTAATAGACACATGATAATACACATGAACATGAAGCCCTATAAGTGTCAGATGTGCGACGAGACATTTCGAACTACTCTTCTCTGCAGAAAGCACATGAAGAAAGATCACATTGTAGGAACAAGAGATCTGGGAatagaggaagaagaaaacccTGATAGAGTTGTTCTGAAAAGGAACCGAACAGGAATCATCACTTTCACAGAGGAGCAGACAGCAGAACTCGCCAAGACAGAACCCCGCGAAGATGCCACAGTGTCAGAGAAGGTGCTGGCGCAGTCTGCTGCTGAAAGGGACCGCATCAGTGAGATCAAAGACAAGGCAGTCGAGCTAGAAACTGAACCCAAGTTTGCCAACCGTTGCAACTACTGTCCCAAGAGCTTTAAAAAGCCCAatattattaaaaacaatgtaaaactatTTTACTCCCTCCTTAACTTATCATTGTGTTCACATCATTTTTCTGTACTGATGGGTTCCTGTGTTGTGATGGCTGCAGGTCAGAAGCTCTTTAATTGCCACATGTGCAACACATCCTTTTCCACCAAAGGGAGCCTGAAAGTCCACATGCGGCTGCACACAGGCTCCAAGCCCTTCAAGTGCCCCTTCTGTGACCTTCGCTTCCGGACTTCAGGCCATAGAAAAACCCACATCCAGTGCCACTACAAGCCTTCCTCAGAGTCTAAGAAGCACAAGAAGGCTGTGTTGAGGCAGCCATCAGAACCACTGCCTCCTGTCAATCTGCTCCAAGCCACATCTGGGGACCCCAATGTATTCATCTCCAACAACTCTGTCCTGGCTGGGCAGTTTGAGCAGAACCTCTTGCAACAAAGCATTGTGGGACAGGCCATTCTTCCTGCATCTGTGTCAAGGGGAGATCTCACGGTTTCCCTTACAGAAGCTGGACTTGCCACTCTTGAAGGCATTCATCTTCAGCTTACTCCAACTAATTTAGTGTGTCCCAATGTACAAATCTCTGGCATTGACACGAGCAATATTAACAACATCACATTGCAAATAGATCCAAGTATTTTGCAGCAGACTCTACAGGGCAATCTGCTCTCCCATCAACTAACAGCAGATTCCAGTCTTACCCAACAACCAGGAGCACATCTGATCACAGGTGACTCCACAGTGCCAGCTAATGTTGTGATCCACCCGCTGTTACAGCCAGCAGTGACCTCCGCCAACATGACCATTGCAGGTCTGACTGAGCAAGACACCCATGAGATCACCCTGACCATCAATAATTCTAGCCTCAGTCAAGTACTGGCTCAGGCCACTGGCTCCAACTCCACTCAGTCATCTACAAGTCCTCAGGAGATTACACTGACCATATCAGGTCAAGATATTATCCCACAGCACAATGCAGCTGGAAATGCTGAGATGAATGAGAGCATTAGACTGTCACCCCCTATGAATAACCAGCCAAATGGAGCAACTTTGACTATTGGGAATGATCAGCTTCTACCTCAAAGCCCAAATAATACTGGAATTACAGTAGCAAACAGCCTTCCTTCCTCCACATCCCTGTCACAAGCTCCAGTCACATCCCAGAGTCTTGTGATGTCTTCTGCGGGGATGGGCAGTGATGGCAGTGTGACCCTTACTCTGGCAGACACACAGGGCATGCTATCTGGGAGCCTGGATACTGTCACACTCAACATCACACCTCAGGGGCAACAGTTTCCTGCCATTCTTGGTGACCCCAATCTTCCAGGGCAACAAGGAAATACTTCCCAACAAGTGATATTGGTTAGCCATCCAGCACAGGGCACAGCAGGCGTCCCAGATGACAGTTTTCGGGTCCCAGAGATTACCAGACACATTTCGAAGGATGGTGCAGCAGAGCAGTCCAACCAGCTCAGCCAGTGCTTTTACTGCAATCACGTATTTCTCACTGCCATCATGCTGAGGCGACACTGCAGACAGGCTCATGGCAAGGAAAGGTGCCATGTATGTCGGATCTGTAACAAAGCTTTCAAGAGAGCTACCCACCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021909 True 3104 mRNA 0.49 16 38180080 38224604

Neighbor

gene id symbol gene type direction distance location
AMCG00021907 galr1,LOC107373077,LOC102797365 coding downstream 221547 37957755 ~ 37958533 (-)
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding downstream 945239 37212616 ~ 37234841 (-)
AMCG00021905 NA coding downstream 1008701 37091198 ~ 37171379 (-)
AMCG00021904 NA coding downstream 1180440 36992851 ~ 36999640 (-)
AMCG00021903 atp9b coding downstream 1204964 36944033 ~ 36975116 (-)
AMCG00021908 NA coding upstream 13534 38238138 ~ 38245037 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding upstream 594807 38819411 ~ 38826295 (-)
AMCG00021921 NA coding upstream 714003 38938607 ~ 38945501 (-)
AMCG00021920 znf407,LOC106583495,LOC106605077 coding upstream 820181 39044785 ~ 39052673 (-)
AMCG00021919 NA coding upstream 966294 39190898 ~ 39192682 (-)
G89588 NA non-coding downstream 24959 38154760 ~ 38155121 (-)
G89587 NA non-coding downstream 26567 38153228 ~ 38153513 (-)
G89584 NA non-coding downstream 29030 38135260 ~ 38151050 (-)
G89570 NA non-coding downstream 199666 37980089 ~ 37980414 (-)
G89567 NA non-coding downstream 237400 37942347 ~ 37942680 (-)
G89609 NA non-coding upstream 124619 38349223 ~ 38349555 (-)
G89612 NA non-coding upstream 187443 38412047 ~ 38414262 (-)
G89617 NA non-coding upstream 197129 38421733 ~ 38422676 (-)
G89618 NA non-coding upstream 198096 38422700 ~ 38425440 (-)
G89625 NA non-coding upstream 266731 38491335 ~ 38491585 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 1492438 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 1642362 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 1741730 36414879 ~ 36438350 (-)
G89368 NA other downstream 2233096 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 2784309 35375016 ~ 35395771 (-)
G89598 NA other upstream 36783 38261387 ~ 38283855 (-)
G89611 NA other upstream 170967 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 1031275 39255879 ~ 39276056 (-)
G89765 NA other upstream 1261229 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 1262293 39486897 ~ 39548802 (-)

Expression


Co-expression Network