AMCG00021919


Basic Information

Item Value
gene id AMCG00021919
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39190898 ~ 39192682 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021919
ATGGACCGTCACTGTGCTACCAAGAAGCATAAGAACCGTGCTGAGGCAGCCAGAAATAAGAATCCAGAGGATGACCAAGCTTTTCCTGATAGTGTCATTGAGGTTCTCAACAATGGACAGGTTGCAAACATTGAAGTCCTTGGAGAACATATCAGTGAGGTAGCAGCCATGGAAGCAGGAAACCAGGAAGAAACCATGATTAATCAATCAAAAGGAGAGATTGGCACTGATGAAGCATTAGATGATGATGGGCTTCCTTCTCATAATGAGGAAAACATTGAAAACCAGACTGGTGTTGATCAAGTTTTACCTGGAGATCACGACAGCAGCGAGCAAGACCTCGGTGGTACCATgcagaaaaaaaACAAAGGCAATTTAAAGGATGTGAAGGATGGGCATATTAAGTCCAACACTATTGAGAATGTAGTGACCTGCAGTAGTGAGGATGCAGAACAATCTGAAATGGAAAGTGACAATCAAACTACTAGTCAGGAAAAACAAGGTGATTCTGAAGATAATGTGTGTGATGATACAACTGAAGGTCACCCTATCCCTGATGAAACCACACTGGATAACACAAATGAGCCTTCTGATAGTTGCTCAGAAAGAGTTGAGATGAACATCAGTCAAGGAGAGAGCCAGCTCACAAGACTTAACAAATCCAACACTATATTGGTAAAAGAGAACATCAGTGACCAAGCTTTACAAGAAGGTGTTGCAGAAGATGTGAATGAGGGTTTACAAGACCCTGATTTAGAGATACTGGCTAGTAATATTGCCAGTCCCTGTCTAACTAAGCAGTTAGTCAGGGCTATTCCGTTTGATGCCTCGATTGTTCCTCTCAAACCCAGTTCAGATTCTGAAATCACAGATGTGGATGGAGGTCAGTCTTCTGAAAGGAGTGCAATCAACAGCTCTTCTACCATGCCCACCCCATCAAAGGAAgtgagaaagaagaagaaatcgGATGGACTGACACAGAGTGAGAGTGTGCGAATTCGGTGTGAAGACTGTGGCTTCATGGCTGATGGGCTGAGTGGGCTGAACGTGCACATATCTATGAAACACCCCTCGAAGGAGAAGCACTTTCATTGTTTGCTCTGTGGGAAGTCCTTTTACACTGAGAGCAATCTCCACCAGCACCTGACCAGTGTAGGTCATCTGAGAAACGAGCAAGCCAGTATAGAGGAGCTCCCAGAGGGGGGTGCCACATTCAAGTGCGTGAAATGCACTGACCCCTTTGAGACAGAGCAGGACCTCTTCATGCACATCAAAGAGAAGCATGAAGAGCTGCTCCGAGAAGTTAACAAGTACATTCTGGAAGACACAGAGCAGATCAACAAGGAACGAGAGGAGAATCAAGGCAACGTCTGCAAGTACTGCGGGAAGGTGTGCAAAAGCAGCAACTCCATGGCTTTTTTGGCCCACATtcgcacacacacaggtacgTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021919 True 1452 mRNA 0.45 2 39190898 39192682

Neighbor

gene id symbol gene type direction distance location
AMCG00021920 znf407,LOC106583495,LOC106605077 coding downstream 138225 39044785 ~ 39052673 (-)
AMCG00021921 NA coding downstream 245397 38938607 ~ 38945501 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding downstream 364603 38819411 ~ 38826295 (-)
AMCG00021908 NA coding downstream 945861 38238138 ~ 38245037 (-)
AMCG00021909 NA coding downstream 966294 38180080 ~ 38224604 (-)
AMCG00021917 NA coding upstream 16333 39209015 ~ 39234436 (-)
AMCG00021916 NA coding upstream 90588 39283270 ~ 39285802 (-)
AMCG00021922 NA coding upstream 179124 39371806 ~ 39373457 (-)
AMCG00021926 NA coding upstream 227575 39420257 ~ 39423376 (-)
AMCG00021923 NA coding upstream 251806 39444488 ~ 39448728 (-)
G89657 NA non-coding downstream 251074 38939562 ~ 38939824 (-)
G89631 NA non-coding downstream 373748 38816944 ~ 38817150 (-)
G89630 NA non-coding downstream 546860 38643828 ~ 38644038 (-)
G89625 NA non-coding downstream 699313 38491335 ~ 38491585 (-)
G89618 NA non-coding downstream 765458 38422700 ~ 38425440 (-)
G89716 NA non-coding upstream 141243 39333925 ~ 39334125 (-)
G89723 NA non-coding upstream 190967 39383649 ~ 39385676 (-)
G89724 NA non-coding upstream 193136 39385818 ~ 39386082 (-)
G89748 NA non-coding upstream 269793 39462475 ~ 39462921 (-)
G89749 NA non-coding upstream 271750 39464432 ~ 39465633 (-)
G89611 NA other downstream 793143 38395571 ~ 38397755 (-)
G89598 NA other downstream 907043 38261387 ~ 38283855 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 2503256 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 2653180 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 2752548 36414879 ~ 36438350 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 63197 39255879 ~ 39276056 (-)
G89765 NA other upstream 293151 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 294215 39486897 ~ 39548802 (-)

Expression


Co-expression Network