AMCG00021921


Basic Information

Item Value
gene id AMCG00021921
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38938607 ~ 38945501 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021921
atgggtatattttgtatttcaggaATTGTCTCCAAATCCTTTGAATGTCGTCTAAAAGGCCAGGGAGCTTCCTTTGTGGAGACAGATTCTGCGTTCATTGCAGATGAGTCTTCCCCAGTAAAAGAAAGAGTGCCGAGAGGCTCCAGGAGACAGCTCACATCCCAGCCTGAGTCCGTCCAGCAGGTTATCATCATCCAGGGCTTCCCTGAGGACTACGGGGGCGAGTATGCCATCGACGCCGCCATGGAGGAGTCTGCTGCTGCCACCCTTCAGACTCTGGCCATGGGAGGCCAGGTCACTGAAGTGGTGCACATCACAGAAGATGGGCAGGTCATTTCCACAAGCGGGAGCAGGGCTCACATGAGCCGCATGCTTCCTGGGGAAATAGAGCTCCCGGCGGGAACAACTCAGGTAGTGGTAGTAGAATCTCCCATGGAAGGGACCTCCTGTGAAGAGATGATGACAGGACAGGAGACCACAGTTCACACCACTGAATCCTCTTCAGCTCTGGATGCCCTTCTGTGTGCCGTCACAGAACTGGGCACCATGAAAGAACAACAAGAGCAGCGGGACTTGACCAAGACCCTGGAAAGTGCGCAGTTCAAAGATGTCGTCCAAGAGGTCTTGCAGTTCGCCATGTGTGACATGGCAACTGCTGGCCACCTCATGAAGGAGGGCCTGACGCGTGTCATCGTCAATGATGAAGGTAGAGTCCACATGGTGTCAGGAGGAGGATCCCAGATCATCATGCAAGAGGAAGGTCATATGATCAGCATGCCCAACCAGCACATGGACCTGGTGGGTTCTGATGGGGAGATCTCCCAAATCATTGTCACAGAGGGCATAGCACGAGCCATGGTCCAAAACTCTGGCCAGAGCTTCTCAGGagaaaacacacattacattgtCACTGAACTTGATGACTCCACTCTCCAAGTGGAAGGGGCAGTCTATTCCCAAAATGCACCAGTGAAAAGCCCCTGTCAAGAAGCCACTGTATACCAAGGGGAAGAAGGTAAGAGAGaaattgtgatttttctgtACAGTCCTCCTCCTTCCGACAGGATCTCTCTCTAG

Function

GO: NA

KEGG:

id description
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021921 True 1077 mRNA 0.52 3 38938607 38945501

Neighbor

gene id symbol gene type direction distance location
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding downstream 112312 38819411 ~ 38826295 (-)
AMCG00021908 NA coding downstream 693570 38238138 ~ 38245037 (-)
AMCG00021909 NA coding downstream 714003 38180080 ~ 38224604 (-)
AMCG00021907 galr1,LOC107373077,LOC102797365 coding downstream 980074 37957755 ~ 37958533 (-)
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding downstream 1703766 37212616 ~ 37234841 (-)
AMCG00021920 znf407,LOC106583495,LOC106605077 coding upstream 99284 39044785 ~ 39052673 (-)
AMCG00021919 NA coding upstream 245397 39190898 ~ 39192682 (-)
AMCG00021917 NA coding upstream 263514 39209015 ~ 39234436 (-)
AMCG00021916 NA coding upstream 337769 39283270 ~ 39285802 (-)
AMCG00021922 NA coding upstream 426305 39371806 ~ 39373457 (-)
G89631 NA non-coding downstream 121457 38816944 ~ 38817150 (-)
G89630 NA non-coding downstream 294569 38643828 ~ 38644038 (-)
G89625 NA non-coding downstream 447022 38491335 ~ 38491585 (-)
G89618 NA non-coding downstream 513167 38422700 ~ 38425440 (-)
G89617 NA non-coding downstream 515931 38421733 ~ 38422676 (-)
G89716 NA non-coding upstream 388424 39333925 ~ 39334125 (-)
G89723 NA non-coding upstream 438148 39383649 ~ 39385676 (-)
G89724 NA non-coding upstream 440317 39385818 ~ 39386082 (-)
G89748 NA non-coding upstream 516974 39462475 ~ 39462921 (-)
G89749 NA non-coding upstream 518931 39464432 ~ 39465633 (-)
G89611 NA other downstream 540852 38395571 ~ 38397755 (-)
G89598 NA other downstream 654752 38261387 ~ 38283855 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 2250965 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 2400889 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 2500257 36414879 ~ 36438350 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 310378 39255879 ~ 39276056 (-)
G89765 NA other upstream 540332 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 541396 39486897 ~ 39548802 (-)

Expression


Co-expression Network