AMCG00021923


Basic Information

Item Value
gene id AMCG00021923
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39444488 ~ 39448728 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021923
tttttgacaTTACCCTTTGTTTTCCCTTGTGGGTGTCTAAGATTGTTTGTCTTGtgttctgatttattttgcagagaTCAGATGGCAGACTCATGGTGGAACAGTCCCGTGGTTACGCACATACTAGTAGCTCTGTTTGGAATGGGCTCCTGGATCTCTGTGAACACGCTGTGGGTGGAACTGCCTGTGGTGGTTAATGTTCTACCAGAAAagtGGAGTTTACCTGCCTACCTTTCAGTACTAATTGCGTTTGGAAACCTGGGTCCGGTGGCGGTGACTTTAACACATCACTGTGCCCCAGGAAGGCTAAATGAACGATTAGTTATCCATAGTATCCAGGCACTGGCTGTAGTGGCATCTGCCTTTCTCGCCATCTTCTGGAGCCAAAAGGTCATGGTGTCTGGAGAACTTCATTCTGTGCCTTACTTCTTGCTGACATTTATCCTTGCACTGGTTTGTTGTACATCTAATGTTACCTTCCTGCCTTTTATGTATCGATTCCCCCCAGAGTACATACGCACTTTTTTTGTCGGCCAGGGCCTCAGTGCGCTATTCCCTTGTGTGTTAGCGCTGGGACAAGGCATAGGAAAGTTGGAGTGTGTGAACAGCACTTCAGGAAATGGCACTCTGGAGCCAAACTATCACAAGGAGAACTTCCCAGCACAAAACTTTTTCTGGTTTCTCTTTCTTATGCTGGGAATATCAGGATTATCTTTCGTGGCCTTGACTTTGAGGATTTCTACTTCACCTGCACAGGAGGCAAAAGATGCTCCTCCCTCCTCCAAGGAGGAAACTGAAGAAACGCATTCACTCCAAAATGGGACTGTGCCGGTGTCTGAAGACCAGGTGGAGGTTGTTAAGAGTCCCTCTTGCCTAACTTTTTGGACTTCTCGCAACATCTACCTGCTGTTGCTCCTGGGTGTCTCCAACGCCCTGTCAAATGGAATCCTGCCCTCCGTGCAGAGCTTTACTTGTCTACCATATGGGAAAATGGCCTTTCACCTTTCAGTTGTTCTGGGCAACATTGCAAACCCTCTGGCCTGCTTCTTAGCAATGTTTGTCCTCTGCAGGTCCAGTGCAGGGCTTGGGGCCATGTCAGTGGCAGGTGGGGTCTTTGCAGCCTACCTTCTTGCTCTTGCTGCTCTCAGTCCTTGCCCTCCACTTCTAGGAAATGCTGTAGGGATGCTTCTGGTGGTGATCTCCTggattgtgtttactgggctctTCTCCTACCTGAAGGTGGTTATTGGGTCTCTGCTCCACGAGGCCGGCCATGCTGCCCTGCTCTGGTGTGGTGTGTTCATCCAGGCCGGCTCCCTGATTGGGGCGCTCATCATGTTCCCACTGGTCAGCATCTATAACGTCTTTCAAAGTGCACAGGACTGCATGGACAACTGTAGTCAATAAATCTGGGGAGAATATACTCTCAGGGAGCTGGCACAGACACCCACTTCAGATGTACACCAtggttgatatatata

Function

GO: NA

KEGG:

id description
K22117 SLC52A1_2, RFT1_3; riboflavin transporter 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021923 True 1481 mRNA 0.49 4 39444488 39448728

Neighbor

gene id symbol gene type direction distance location
AMCG00021926 NA coding downstream 21112 39420257 ~ 39423376 (-)
AMCG00021922 NA coding downstream 71031 39371806 ~ 39373457 (-)
AMCG00021916 NA coding downstream 158686 39283270 ~ 39285802 (-)
AMCG00021917 NA coding downstream 210052 39209015 ~ 39234436 (-)
AMCG00021919 NA coding downstream 251806 39190898 ~ 39192682 (-)
AMCG00021925 NA coding upstream 27248 39475976 ~ 39479016 (-)
AMCG00021928 NA coding upstream 106779 39555507 ~ 39556745 (-)
G89724 NA non-coding downstream 58406 39385818 ~ 39386082 (-)
G89723 NA non-coding downstream 58812 39383649 ~ 39385676 (-)
G89716 NA non-coding downstream 110363 39333925 ~ 39334125 (-)
G89657 NA non-coding downstream 504664 38939562 ~ 38939824 (-)
G89631 NA non-coding downstream 627338 38816944 ~ 38817150 (-)
G89748 NA non-coding upstream 13747 39462475 ~ 39462921 (-)
G89749 NA non-coding upstream 15704 39464432 ~ 39465633 (-)
G89751 NA non-coding upstream 20037 39468765 ~ 39470104 (-)
G89776 NA non-coding upstream 97213 39545941 ~ 39546146 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other downstream 168432 39255879 ~ 39276056 (-)
G89611 NA other downstream 1046733 38395571 ~ 38397755 (-)
G89598 NA other downstream 1160633 38261387 ~ 38283855 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 2756846 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 2906770 36524509 ~ 36537718 (-)
G89765 NA other upstream 37105 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 38169 39486897 ~ 39548802 (-)

Expression


Co-expression Network