G83205


Basic Information

Item Value
gene id G83205
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 922859 ~ 926564 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU103832
atatatatgtaatatatatatatatatatatatatatatatatatataaacagtgcCTGAAGAGTCCAAAAaatcaagagagagagatgcatggtcaatcaaaaggaatttaatAGGAATTCAATAATCAATCTCAACAGTCTCAGAGAAgttacaggcacttttatgcagaccagacaggagagaaatttcacggcccacatgtctgtcccatgaTGAGTGTAGGTTCGGTTTCTGCCCGACAACTGCTCAGGAGGAaccatatatagtcaaaccagGGGGgaattaaggcatacgtaatgtttaatataaggggagTTTGTACGATGAATCAcagttgaactatagcacagtacgaccgtgaccttgtttacacaagCATGGTTCTTCAGTGCCTCCTGATTGTATAGATGCAGGAAGTCAGCAAACCTTGTTTGTTGGGTGGAGGAGTTGGTGGTTGAAAGGTCTACTCCTCAGCCAGGCCAATCACGTGGTACCTGGCCACGCCTGGTACAACAGCAAAATACgtataacaatgtattttcaatatataaaatagatcACAATATGCATGGTGAGTACCAGGTCTgaatgttaattgtttttgacaAAGTGATTTCAACAGACCCCCTAATTGGGCTGAAGAGTTTTAGCTCAAATTTCAGCAGCACCCAATTCCATATTCCAATATAATTTGTCATGATCCATCTATTTTCCAAAGACATTTCCCAGGGACAAAAGCTCTTTCCTTCCAGTGGGATCCACTGCTAAAGATACTGAAGaccatgtcatgttttttttgtttttgttttttatcacgTTTCTCACTTTTACTTTTCCAAAATAGATTGcagattacatttcagtttgacAGTTATCAGCCAGAGTACAATGCCAACCACGACATTAATCAAGGATGTAGTAATGATGGACTCAAATAACACTCAGTGGATTGAGGCTGTAATTGTCCACTTTGTCTCCAGTTTTGTATTTACTCGCAACAGAAAAGAATCACCtctgtacaataaaataagagtCCCAGATCTAAGAGTGGCACATTAGAAGGGTGAAAAGCATATAAAACAGACGCCACAGGTTTCCAGTCGGATCTAAACATATTAAACGCACGACACCACAGCTGCCAAGTCCCATGTTTCACCCACATTCTTCTATCTTCATGAAGGTCTCACAGCCATCACTCACAGTTTGACCAGTTGTTCACCATGGCCATGCCATCCTGCTGCATAACCACATTGTCTTCACCACATACTTCATACATCTGTGAGATTGAGGAGTGTTCGTTGGCCTCCAGATGGAGTTAATGGCTTCTCGAGGTTTCCCTTGGTCATCTCCAAGGTGCtcttcacacatttttttACCAAATCATGGGTGTCTGAGGTTTGCCTATGGTTCAGTAACATGTCCAGGTTTGGACTTGCTGACGTAGTTATTCTCCACGTTGACCGGGTAGAGGAGCGGGATCGCGATGCCCTGGTCTGGTTTTTGATAGGCGGAAATCAAGTTCTTGATCTTTCGAAACATTCGTTTATGGACACCTGGAGCCG

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103832 True 1565 lncRNA 0.41 2 922859 926564

Neighbor

gene id symbol gene type direction distance location
AMCG00021048 thoc2,LOC107733416,LOC107741598 coding downstream 90084 780726 ~ 832775 (-)
AMCG00021042 nxt2,LOC107600148,LOC107561287,LOC106604300 coding downstream 592027 330099 ~ 330832 (-)
AMCG00021041 NA coding downstream 633353 287247 ~ 289506 (-)
AMCG00021051 LOC106567800 coding upstream 1728 928292 ~ 957921 (-)
AMCG00021053 NA coding upstream 55373 981937 ~ 1011465 (-)
AMCG00021057 LOC106603321 coding upstream 85975 1012539 ~ 1025365 (-)
AMCG00021056 LOC106567800 coding upstream 102857 1029421 ~ 1041823 (-)
AMCG00021054 LOC106603321 coding upstream 185824 1112388 ~ 1114528 (-)
G83091 NA non-coding downstream 837732 84874 ~ 85127 (-)
G83081 NA non-coding downstream 885968 36247 ~ 36891 (-)
G83294 NA non-coding upstream 928318 1854882 ~ 1865227 (-)
G83342 zc3h12b non-coding upstream 1153105 2079669 ~ 2080014 (-)
G83343 NA non-coding upstream 1156613 2083177 ~ 2086079 (-)
G83346 NA non-coding upstream 1178500 2105064 ~ 2106398 (-)
G83352 msn,LOC106567791,LOC102776036 non-coding upstream 1213726 2140290 ~ 2141743 (-)
G83313 NA other upstream 1046596 1973160 ~ 1977968 (-)
G83428 NA other upstream 1530437 2457001 ~ 2459379 (-)
AMCG00021090 NA other upstream 1751021 2677585 ~ 2718919 (-)
G83761 NA other upstream 3776691 4703255 ~ 4751235 (-)
G83864 NA other upstream 5617928 6544492 ~ 6546577 (-)

Expression


Co-expression Network