G83716


Basic Information

Item Value
gene id G83716
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 4292126 ~ 4292364 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104445
TGTAGTAGCATCTGGCAACCCTGTAGGAGCCAATCAGACCAGAACAGCCACCGTGTTGTATCTGTTGCCATTATATAAGGGGGCTATTTATTTTGGCCGTCTCTCAAGTCTTTAATTATGCAATGCTTTTAATCACTGCCAATTTattgtataatgaaaatgttctgtgcAAAACCtgacacattaaaaacaaaatgtaacaacatAAATTGTATTAGCCAAAGAAATTAAAGTTTCAC

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU104445 True 239 lncRNA 0.36 1 4292126 4292364

Neighbor

gene id symbol gene type direction distance location
AMCG00021112 gpr50,LOC104936099,LOC108436701 coding upstream 376482 3906153 ~ 3915644 (+)
AMCG00021107 NA coding upstream 447837 3841600 ~ 3844289 (+)
AMCG00021108 nono coding upstream 483111 3804211 ~ 3809015 (+)
AMCG00021101 NA coding upstream 518818 3762081 ~ 3773308 (+)
AMCG00021106 NA coding upstream 531236 3758599 ~ 3760890 (+)
AMCG00021124 NA coding downstream 446777 4739141 ~ 4751627 (+)
AMCG00021123 NA coding downstream 459815 4752179 ~ 4760646 (+)
AMCG00021126 tsc22d3,zgc:64189,LOC107757743,LOC107666597,LOC107561288,LOC107562102 coding downstream 552387 4844751 ~ 4848172 (+)
AMCG00021127 tsc22d3,LOC108246678,LOC105928685,LOC107377168 coding downstream 598885 4891249 ~ 4894563 (+)
AMCG00021128 pcdh11,LOC107741043,LOC107661995,LOC108417465 coding downstream 1476803 5769167 ~ 5787583 (+)
G83710 NA non-coding upstream 5526 4280108 ~ 4286600 (+)
G83704 NA non-coding upstream 26144 4262001 ~ 4265982 (+)
G83645 NA non-coding upstream 356171 3935696 ~ 3935955 (+)
G83623 NA non-coding upstream 496515 3795344 ~ 3795611 (+)
G83622 NA non-coding upstream 496884 3794989 ~ 3795242 (+)
G83741 NA non-coding downstream 342372 4634736 ~ 4730944 (+)
G83752 NA non-coding downstream 525733 4818097 ~ 4818329 (+)
G83900 NA non-coding downstream 2350818 6643182 ~ 6643523 (+)
G83904 NA non-coding downstream 2368365 6660729 ~ 6662819 (+)
G83914 NA non-coding downstream 2386839 6679203 ~ 6681917 (+)
AMCG00021114 NA other upstream 58329 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 162753 4127070 ~ 4129373 (+)
G83624 NA other upstream 493343 3797841 ~ 3798783 (+)
AMCG00021076 NA other upstream 2061979 2209482 ~ 2230147 (+)
AMCG00021063 NA other upstream 2372760 1917488 ~ 1919366 (+)
AMCG00021133 NA other downstream 2251870 6544234 ~ 6546601 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other downstream 2819633 7111997 ~ 7121237 (+)
AMCG00021180 NA other downstream 3747806 8040170 ~ 8043299 (+)
G84301 NA other downstream 4339363 8631727 ~ 8633410 (+)
G84425 NA other downstream 5123903 9416267 ~ 9423419 (+)

Expression


Co-expression Network