G83752


Basic Information

Item Value
gene id G83752
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 4818097 ~ 4818329 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104492
CCCCAAAGAACACCTCAGTGTCCGTCAGCCCCTCTGGTGAAATAGTGGAAGGCAGTCGTGTCACCCTGACCTGCCGCCGCAGCAATGCAAACCCACCAGTGCAGAGATACGCCTGGTTTAAGAGCAGTGGAGCTGCTGTCTGGCAGAAAGGATCAGGGCAGAGTTTCACCATCAAAGAGAGCAGCTCTGGAGACAGTGGGCAGTACTACTGTGAAGCACACAATACACATGGA

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104492 True 233 lncRNA 0.55 1 4818097 4818329

Neighbor

gene id symbol gene type direction distance location
AMCG00021123 NA coding upstream 57451 4752179 ~ 4760646 (+)
AMCG00021124 NA coding upstream 66470 4739141 ~ 4751627 (+)
AMCG00021112 gpr50,LOC104936099,LOC108436701 coding upstream 902453 3906153 ~ 3915644 (+)
AMCG00021107 NA coding upstream 973808 3841600 ~ 3844289 (+)
AMCG00021108 nono coding upstream 1009082 3804211 ~ 3809015 (+)
AMCG00021126 tsc22d3,zgc:64189,LOC107757743,LOC107666597,LOC107561288,LOC107562102 coding downstream 26422 4844751 ~ 4848172 (+)
AMCG00021127 tsc22d3,LOC108246678,LOC105928685,LOC107377168 coding downstream 72920 4891249 ~ 4894563 (+)
AMCG00021128 pcdh11,LOC107741043,LOC107661995,LOC108417465 coding downstream 950838 5769167 ~ 5787583 (+)
AMCG00021129 LOC107664771,LOC101066135 coding downstream 1063587 5881916 ~ 5882834 (+)
AMCG00021130 NA coding downstream 1148159 5966488 ~ 5970373 (+)
G83741 NA non-coding upstream 87153 4634736 ~ 4730944 (+)
G83716 NA non-coding upstream 525733 4292126 ~ 4292364 (+)
G83710 NA non-coding upstream 531497 4280108 ~ 4286600 (+)
G83704 NA non-coding upstream 552115 4262001 ~ 4265982 (+)
G83645 NA non-coding upstream 882142 3935696 ~ 3935955 (+)
G83900 NA non-coding downstream 1824853 6643182 ~ 6643523 (+)
G83904 NA non-coding downstream 1842400 6660729 ~ 6662819 (+)
G83914 NA non-coding downstream 1860874 6679203 ~ 6681917 (+)
G83976 NA non-coding downstream 2232868 7051197 ~ 7056132 (+)
G83983 NA non-coding downstream 2266889 7085218 ~ 7088239 (+)
AMCG00021114 NA other upstream 584300 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 688724 4127070 ~ 4129373 (+)
G83624 NA other upstream 1019314 3797841 ~ 3798783 (+)
AMCG00021076 NA other upstream 2587950 2209482 ~ 2230147 (+)
AMCG00021063 NA other upstream 2898731 1917488 ~ 1919366 (+)
AMCG00021133 NA other downstream 1725905 6544234 ~ 6546601 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other downstream 2293668 7111997 ~ 7121237 (+)
AMCG00021180 NA other downstream 3221841 8040170 ~ 8043299 (+)
G84301 NA other downstream 3813398 8631727 ~ 8633410 (+)
G84425 NA other downstream 4597938 9416267 ~ 9423419 (+)

Expression


Co-expression Network