G84155


Basic Information

Item Value
gene id G84155
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 7978217 ~ 7979826 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104988
TTTagtttaaaaattgtattattattaatggtacggtttacatttaacaatgctttttcataataaaaaaacaaaaatcaaacttCCATTTCCAGTTTTCTCTCTAGGTATTAACAGAATAGGTTTCAAATAGGGAGGCTTTATTCAGAAATGGTTATggattaaatatgaaatacatgattacagatacaaaattacatatatCACCATTGGAAGAACTGTACTTCACATAattctaataaaatatttatacatttttgtatttttggcatatgaaaaaaatattttcagtatatAAAGTTATCAAGCACTTAATACATCTCTgagcgttttttttttgttttttttggtacaaGTAAATGTCAAATGCAGTAAATAATCATAAAGCAGCTTCATATAAGAATATCCAGTTCTGGTTTACTAAAAGCAAGAACCAGCTTTAATTTCAGAACATTACAGAGCTGTTACAATGGATTAAACTGAGCATTGTACCCTAAGTTGGCATGAGATCTTCATATCTAATGCCCAGTAAACAGCAACCAAATACAAGATAATAGTTAAATTGCATATTTGCCATGGCAACCAAACTTAGAAATTGGCTAGTATTTAACAGAACTCAGTCCAAGGCATTCCCTGTGTGTGCGCGTTTCGTGCGTTTCTTTGTGTccattaatttatgtaatttccCCTTTATGacgaataatacattttcttacaggATATCAACTAAAATATAATTGGTAACAAATGACCAAATCTTGGGAACTATATGGGAGGTTAAAGCTTAATCCAGCTCAGTCAAAACACCAACAGATTTGGTGATTTCCGTTTAGTACCTTTCAAGATCTCATCCTACAGATtctcagtaaaataaaaaaacggtTCTGTCCTTGCTCAACCAAAATTTCTCAGGGAGATTGTGCCTGAAAGCCGAGTGCAACCCATCATGCCTTTCTATAAATCATTTACAAGCACTGgaatcaataaaacaatgctaAAAAGTGTACTTTTTATATTCTATAACCCTCAAAAAGACTGCAGGCCtatttttgatttgtgtttgttactgCTTTCTTTTGATGACAACTTACAGTAATTAAAGGTAGTCTTAGCAAAATTAGCACAAATAactattattcaaaataataaacaggatCATTAAAGTCAAATAATACTATATAAGGTTAAGTATCATCCGAAGTTGCTTATTACTTCATATGCAATGGATACACTTTATATCGTTAAGACTGTGACAAAAGGTGCTGGAATGTAAGATCCCCTTTTGCAGTAGCAACAGATCAGTGTAATACTCTCAGTTTCtctaacagaattaaaaatatagaaacattACGATTAATCAGAATGAACAAAACACTGGCAAAGGTATACGTTCTTTGAAgttatttcagatttaattactGAACTATCTTATACCTCTTTTGCACCAGTATAGGCATGTATTGCAGCATAGGATTTGTAATAATACTAACATATAGCCACTGAAGGTTTGTTTGAGTGTTCACTGTTTTAAATCCAAGTTCTGATCAGGTTGCGTTTTCCATTTCATGGTAATACAGCAGTCTGTAATGCAGCTCTAACAAAAGCNNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104988 True 1610 lncRNA 0.32 1 7978217 7979826

Neighbor

gene id symbol gene type direction distance location
AMCG00021171 NA coding upstream 28631 7934355 ~ 7949586 (+)
AMCG00021170 NA coding upstream 46701 7925183 ~ 7931516 (+)
AMCG00021172 LOC108434852 coding upstream 72183 7872156 ~ 7906034 (+)
AMCG00021168 LOC105903079,LOC105902376 coding upstream 176944 7786997 ~ 7801273 (+)
AMCG00021167 NA coding upstream 211371 7762021 ~ 7766846 (+)
AMCG00021174 NA coding downstream 52179 8032005 ~ 8035358 (+)
AMCG00021179 NA coding downstream 69005 8048831 ~ 8074602 (+)
AMCG00021181 hdac8,LOC107707919,LOC107711573 coding downstream 95441 8075267 ~ 8091708 (+)
AMCG00021177 NA coding downstream 125582 8105408 ~ 8105869 (+)
AMCG00021178 rps4x,LOC103480264,LOC107373838,LOC103372676 coding downstream 132189 8112015 ~ 8116824 (+)
G84095 NA non-coding upstream 277534 7657193 ~ 7700683 (+)
G84090 NA non-coding upstream 418097 7553620 ~ 7560120 (+)
G84078 NA non-coding upstream 466229 7511369 ~ 7511988 (+)
G84061 NA non-coding upstream 551870 7425931 ~ 7426347 (+)
G84049 NA non-coding upstream 579699 7397060 ~ 7398518 (+)
G84196 NA non-coding downstream 222012 8201838 ~ 8207378 (+)
G84244 NA non-coding downstream 395505 8375331 ~ 8376038 (+)
G84276 NA non-coding downstream 576135 8555961 ~ 8558418 (+)
G84298 NA non-coding downstream 607772 8587598 ~ 8588963 (+)
G84477 LOC108440084,LOC106603334,LOC103024645,LOC105026974 non-coding downstream 1884860 9864686 ~ 9878867 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 856980 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 1431616 6544234 ~ 6546601 (+)
AMCG00021114 NA other upstream 3744420 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 3848844 4127070 ~ 4129373 (+)
G83624 NA other upstream 4179434 3797841 ~ 3798783 (+)
AMCG00021180 NA other downstream 60344 8040170 ~ 8043299 (+)
G84301 NA other downstream 651901 8631727 ~ 8633410 (+)
G84425 NA other downstream 1436441 9416267 ~ 9423419 (+)
AMCG00021240 LOC107742636 other downstream 2490237 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 2983322 10963148 ~ 10987174 (+)

Expression


Co-expression Network