G84244


Basic Information

Item Value
gene id G84244
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 8375331 ~ 8376038 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105099
AGTCAGTATAGGATAGCATCTTCACAACTCATTTGACCGTTTCTGACTTTATCTGGCCTCCACAGGTCCTTCCGGAGCTAAAGGCACTCCCGGACAGCCAGGTCGACCAGGCCAGCCTGGGCAGCCGGGTTCCCCAGGGTTCAGGGGAGAAAAGGGAGATCCTGGCCTACCTGGTTCAGGAATCCCGGGTTTTCCAGGCTCCAAGGGTGACCCCGGCCAGCCTGGGTTCCCTGGTTCGCCAGGACTTAAAGGGACATCGGGTTCCCCTGGACTGCCAGGCCTGCCTGGGAGCCCGGGCAGTAAGGGAGAGCCAGGCCTTCCAGGATTTCAAGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105099 True 334 lncRNA 0.60 2 8375331 8376038

Neighbor

gene id symbol gene type direction distance location
AMCG00021186 NA coding upstream 40572 8331313 ~ 8334759 (+)
AMCG00021187 NA coding upstream 61906 8300022 ~ 8313425 (+)
AMCG00021185 rasl11a,LOC107596470,LOC107707904,LOC108412587,LOC107684967 coding upstream 92039 8276056 ~ 8283292 (+)
AMCG00021183 NA coding upstream 125248 8230399 ~ 8250083 (+)
AMCG00021182 NA coding upstream 173697 8187814 ~ 8201634 (+)
AMCG00021190 NA coding downstream 126458 8502496 ~ 8540649 (+)
AMCG00021189 ankrd46 coding downstream 173016 8549054 ~ 8555160 (+)
AMCG00021194 NA coding downstream 390263 8766301 ~ 8778421 (+)
AMCG00021195 NA coding downstream 404513 8780551 ~ 8801816 (+)
AMCG00021200 hmgb3a,LOC107750581,LOC107678073,LOC106563671,LOC105024648 coding downstream 460174 8836212 ~ 8842182 (+)
G84196 NA non-coding upstream 167953 8201838 ~ 8207378 (+)
G84155 NA non-coding upstream 395505 7978217 ~ 7979826 (+)
G84095 NA non-coding upstream 674648 7657193 ~ 7700683 (+)
G84090 NA non-coding upstream 815211 7553620 ~ 7560120 (+)
G84078 NA non-coding upstream 863343 7511369 ~ 7511988 (+)
G84276 NA non-coding downstream 179923 8555961 ~ 8558418 (+)
G84298 NA non-coding downstream 211560 8587598 ~ 8588963 (+)
G84477 LOC108440084,LOC106603334,LOC103024645,LOC105026974 non-coding downstream 1488648 9864686 ~ 9878867 (+)
G84495 NA non-coding downstream 1630073 10006111 ~ 10009690 (+)
G84535 NA non-coding downstream 1849045 10225083 ~ 10225298 (+)
AMCG00021180 NA other upstream 332032 8040170 ~ 8043299 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 1254094 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 1828730 6544234 ~ 6546601 (+)
AMCG00021114 NA other upstream 4141534 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 4245958 4127070 ~ 4129373 (+)
G84301 NA other downstream 255689 8631727 ~ 8633410 (+)
G84425 NA other downstream 1040229 9416267 ~ 9423419 (+)
AMCG00021240 LOC107742636 other downstream 2094025 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 2587110 10963148 ~ 10987174 (+)
G84749 NA other downstream 3699307 12075345 ~ 12100707 (+)

Expression


Co-expression Network