G84298


Basic Information

Item Value
gene id G84298
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 8587598 ~ 8588963 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105163
agacagaaaaacaaaacaaaaacaaaaaacaacaatattgcAAACTGTAATGGCTTATAGTCATCTCCACAATAACAGAACCCACAAAATAGGGTGCCCACAGTCTGAGTATTTAGAACAAAAGAAATGAGTGCTTTTCTTGCAACCAGGCTGCAACAGTGCGTTCCAGATCCAGAAGGGACACAAAAGgaccccccaacccccatacacacacaccaccccccAACACCACACATTTAACAAGCAGAAGATGACGAGACTGCAGAACACTTAGATTCAGGACTTTCTCTAACACTTCAACCAACTAGAAGCTGATACACTTTCCATAATGAGAGAAGACTCATGGAAAAGCGACAACCCTGCCTGGCCATTTTATTAGGAGGATGTGGGTCTCATACTGGTTGTGGCTCAAGGTAAGAAGCAAAGGTGAACTGCTCTGTTTTTGCTATTGATATTCCTGCTGACAGACAGGCTTCTCAATCAAACTTGAGATCTGCCATACAGAGTTTCTGTAGCTACAGCTTGGTCTGCCATGGCAGGATATCATCCTCTCAAGAGCAGCTCTGGCTTCCCAGTCTCCTGCTATATAGGCCTACTAACAACACCCTTGAAAACACCCAGCATTTTAAATTGAGGCCACTCTTATACGATGCTAAACAAAAGTGCAATTCAAACACATGATCAATCCGGTCCTTTAAAGTGGGCAAGGagcatctgtttttgtttgttttattcctcgaaaaataccaaaaataaatatataaataaaaaaatacagtagacAAAACACTTTGTCTGAAACAACTTATTGGGTAGTAGAAATGTCTGTCGACCAAACTGAAATCGTTTCAGAGCAGGGAAGTGACGGGGCTGTTTGAAAGGACTTGTAGAACTATCGGCATAACCATCGGAACTAAGGCCGAGAAACTGCCGAGCTGTGCAGTATCTGCTTACACTCACAGCAGTTCAGCTGAGGAGCAGCTGGGTTGTTACGTACCGAGAGAACTCAGTCTGCTCATAGAGAGGCCAGTCAGGGTTGAGTGGCCCTTATTGGTTGGAAGAAAAGTCTGCTTCTGAGGTATTATGCAGCAGAGATAAGGCAGTTCAGAGTACTGTAAATAAAGGGAGACAATTTACTTGATAAATCCTACAAAAAAAGAGTATGcctaaacatgaaaataataaggagatcaaaaaacaaacagaagtatGTTGGGGAGAAACAGAGGGGGTGGCGGCGGCACCAGGGTTTCAATTGTAGACAGCTTTTCCAGAATCTTCCACCCGTTCCATTACTCAAGCCTTTCAGCAGCGACCAGAGCACGTGTTATgtcaaaaacataacaaatatataaacattgtaaTA

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105163 True 1366 lncRNA 0.42 1 8587598 8588963

Neighbor

gene id symbol gene type direction distance location
AMCG00021189 ankrd46 coding upstream 32438 8549054 ~ 8555160 (+)
AMCG00021190 NA coding upstream 46949 8502496 ~ 8540649 (+)
AMCG00021186 NA coding upstream 252839 8331313 ~ 8334759 (+)
AMCG00021187 NA coding upstream 274173 8300022 ~ 8313425 (+)
AMCG00021185 rasl11a,LOC107596470,LOC107707904,LOC108412587,LOC107684967 coding upstream 304306 8276056 ~ 8283292 (+)
AMCG00021194 NA coding downstream 177338 8766301 ~ 8778421 (+)
AMCG00021195 NA coding downstream 191588 8780551 ~ 8801816 (+)
AMCG00021200 hmgb3a,LOC107750581,LOC107678073,LOC106563671,LOC105024648 coding downstream 247249 8836212 ~ 8842182 (+)
AMCG00021199 NA coding downstream 263362 8852325 ~ 8855863 (+)
AMCG00021196 trpc5,LOC108431879,LOC101077030,LOC108261176,LOC106523850 coding downstream 348015 8936978 ~ 8939942 (+)
G84276 NA non-coding upstream 29180 8555961 ~ 8558418 (+)
G84244 NA non-coding upstream 211560 8375331 ~ 8376038 (+)
G84196 NA non-coding upstream 380220 8201838 ~ 8207378 (+)
G84155 NA non-coding upstream 607772 7978217 ~ 7979826 (+)
G84095 NA non-coding upstream 886915 7657193 ~ 7700683 (+)
G84477 LOC108440084,LOC106603334,LOC103024645,LOC105026974 non-coding downstream 1275723 9864686 ~ 9878867 (+)
G84495 NA non-coding downstream 1417148 10006111 ~ 10009690 (+)
G84535 NA non-coding downstream 1636120 10225083 ~ 10225298 (+)
G84536 NA non-coding downstream 1638942 10227905 ~ 10262453 (+)
G84549 NA non-coding downstream 1691025 10279988 ~ 10361508 (+)
AMCG00021180 NA other upstream 544299 8040170 ~ 8043299 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 1466361 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 2040997 6544234 ~ 6546601 (+)
AMCG00021114 NA other upstream 4353801 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 4458225 4127070 ~ 4129373 (+)
G84301 NA other downstream 42764 8631727 ~ 8633410 (+)
G84425 NA other downstream 827304 9416267 ~ 9423419 (+)
AMCG00021240 LOC107742636 other downstream 1881100 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 2374185 10963148 ~ 10987174 (+)
G84749 NA other downstream 3486382 12075345 ~ 12100707 (+)

Expression


Co-expression Network