G84301


Basic Information

Item Value
gene id G84301
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 8631727 ~ 8633410 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105166
GCCCTGTTGAGTGGCATCAGGCCTCCTGGCTGCAGGGCCCTTGGCATGCGTTGCTGtagctgttgctgctgctgttggatCAGTTGAGAGTGGCTGGCCGAGGGAGGCTGTGGCATTCCCGAGCTCGACTGCGGTGGCATGTAGTGAGTCAGAGAAGGCTGTCCTGGCCCACCAGGAATGGATGCCACCTTCTGAGCTGGGGGCGGGTCGGGGTCGAAGTGGCTGAGTGGCTTGGTGTTGTTGAAGGAGAAAGGGTCCTGGCCCAAGCCGCCCTTATTCATTAGGCCTTGCTGCATGGCgctgggtggtgggggggctgcTTGCTGTGCcggttgctgctgttgctgtggcGGCTGCTGCTGGGGCTGTGGAGCTGGTTGgctttgttgttgctgctgctgctgctgttgcatcAGCATGTTGAGGCTGGGCTGGCTGGAGGTCATGGCTTTAAACAACTGGCTGGTCATAGCACTCCCTGACCCGTTCTGAGGGCTGTAGGTGTGCTGCTGAACAGCCGGGCTGGAGAGCTTGTCCGGCCTGTAGGGTGGGGAAGGCCTGGTGCCTGAAGAGGGCATGTTGGGCATTAAGTTGGCTTGGGTGCTCTGCCCCCCTGTGGGAGCCATGTTGGGCAACAAGGAATTCTGTGGGCTGAATGGAGGCTGTGCCAGGGCTGGGCTTGCCAGCTTCTCGGGTCTGTAGGGAGGAGAAGGCCCAGTGGACGGGGCAGGAGCCATGCTGGAGATCATGGCGTTCTTGGGGCTCTGGATGCTGGTGGCAGGGCTAAACGGCTGCTGGTGCGGTGAGGAACTTGGAAGCTTTTCAGCACGGTATGGGGGAGATGGACCGGAAGATGGCATTGTCGGCCAGGAAGAGGCTTGGGCAGGTGGCGGCTGTGGTGGAGTGGAGATGTGTTTGCTGTTGGCCATCTGTTGCAGCTGCTGGGCCCGTGACACCTCATGCCAGTTTGTGCCCGAACGGTTCGACAGGGCAGCAGACAGCATGGGTGACCGCGCTTGCGTTTGACTTTGGCTGTTGGAGGACATGGGTGAGGGAACAGCCTTGGTAGGGTGTGGCAGGGAGTATGGAGCCCCAGCTGAAGGAGGTCCAACTTGTGGTGACCCCACCGGAGCTTGGCTGAAGCCTGGGGAGAAGTCCTTGTTGGTCAGGTGACTCTCCAAGTGCGAGGTCCTCGGAGGAGAGCGTTTAGGAGTGCCGTTAGTGTCAGGATGCATGAAGCCCACACTCACTTGCTCATCGCTCTTGTTCCCCAAGATCTTTTCGATATCCAACTCATTGAGAGAGGGATCAGGGTTTTTCGTGAGCTCATCGAGAATGTCTTGCAGCTCCTGCTCCACAGAGGGAGCGTTGCTGTTGCCATTGGGGTCAAAAGAAGGTAGCATGCCCCCATGTCCTGCTGTGCCAGGGCTGGGCTTGATCTCAGAGAAAGGGGAGCCCATACCATTACCATTCATCTGATTGCCATCCAGAAGCCCAGAGTGGCCTCCCACCCCAGTGCTTGAGGAGTAGGGTGAATTCTGGGACATGCTGGGCCCAGAGCCAGGTCCCATAGACAGGGTCACATCTTCCAGGCAGGGTCTCTTGCTGCTACCAGGGATCATCCCATCAGACACGCCGTTAACTACAGGTGAGCTATCATCCGCCAACTTCCTCTTTACCGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105166 True 1684 TUCP 0.59 1 8631727 8633410

Neighbor

gene id symbol gene type direction distance location
AMCG00021189 ankrd46 coding upstream 76567 8549054 ~ 8555160 (+)
AMCG00021190 NA coding upstream 91078 8502496 ~ 8540649 (+)
AMCG00021186 NA coding upstream 296968 8331313 ~ 8334759 (+)
AMCG00021187 NA coding upstream 318302 8300022 ~ 8313425 (+)
AMCG00021185 rasl11a,LOC107596470,LOC107707904,LOC108412587,LOC107684967 coding upstream 348435 8276056 ~ 8283292 (+)
AMCG00021194 NA coding downstream 132891 8766301 ~ 8778421 (+)
AMCG00021195 NA coding downstream 147141 8780551 ~ 8801816 (+)
AMCG00021200 hmgb3a,LOC107750581,LOC107678073,LOC106563671,LOC105024648 coding downstream 202802 8836212 ~ 8842182 (+)
AMCG00021199 NA coding downstream 218915 8852325 ~ 8855863 (+)
AMCG00021196 trpc5,LOC108431879,LOC101077030,LOC108261176,LOC106523850 coding downstream 303568 8936978 ~ 8939942 (+)
G84298 NA non-coding upstream 42764 8587598 ~ 8588963 (+)
G84276 NA non-coding upstream 73309 8555961 ~ 8558418 (+)
G84244 NA non-coding upstream 255689 8375331 ~ 8376038 (+)
G84196 NA non-coding upstream 424349 8201838 ~ 8207378 (+)
G84155 NA non-coding upstream 651901 7978217 ~ 7979826 (+)
G84477 LOC108440084,LOC106603334,LOC103024645,LOC105026974 non-coding downstream 1231276 9864686 ~ 9878867 (+)
G84495 NA non-coding downstream 1372701 10006111 ~ 10009690 (+)
G84535 NA non-coding downstream 1591673 10225083 ~ 10225298 (+)
G84536 NA non-coding downstream 1594495 10227905 ~ 10262453 (+)
G84549 NA non-coding downstream 1646578 10279988 ~ 10361508 (+)
AMCG00021180 NA other upstream 588428 8040170 ~ 8043299 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 1510490 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 2085126 6544234 ~ 6546601 (+)
AMCG00021114 NA other upstream 4397930 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 4502354 4127070 ~ 4129373 (+)
G84425 NA other downstream 782857 9416267 ~ 9423419 (+)
AMCG00021240 LOC107742636 other downstream 1836653 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 2329738 10963148 ~ 10987174 (+)
G84749 NA other downstream 3441935 12075345 ~ 12100707 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 4801897 13435307 ~ 13437408 (+)

Expression


Co-expression Network