G84304


Basic Information

Item Value
gene id G84304
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 8587569 ~ 8589053 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105170
cttaaacaaatctgttttataataggaaatttgtttattttaatttgttttaaatatgcagaCTATATTGTTAGTTTTGGTAATACTGTGTAttacaatgtttatatatttgttatgtttttgacATAACACGTGCTCTGGTCGCTGCTGAAAGGCTTGAGTAATGGAACGGGTGGAAGATTCTGGAAAAGCTGTCTACAATTGAAACCCTGGTGCCGCCGCCACCCCCTCTGTTTCTCCCCAACatacttctgtttgttttttgatctccttattattttcatgtttaggCATACTCTTTTTTTGTAGGATTTATCAAGTAAATTGTCTCCCTTTATTTACAGTACTCTGAACTGCCTTATCTCTGCTGCATAATACCTCAGAAGCAGACTTTTCTTCCAACCAATAAGGGCCACTCAACCCTGACTGGCCTCTCTATGAGCAGACTGAGTTCTCTCGGTACGTAACAACCCAGCTGCTCCTCAGCTGAACTGCTGTGAGTGTAAGCAGATACTGCACAGCTCGGCAGTTTCTCGGCCTTAGTTCCGATGGTTATGCCGATAGTTCTACAAGTCCTTTCAAACAGCCCCGTCACTTCCCTGCTCTGAAACGATTTCAGTTTGGTCGACAGACATTTCTACTACCCAATAAGTTGTTTCAGACAAAGTGTTTTgtctactgtatttttttatttatatatttatttttggtatttttcgaggaataaaacaaacaaaaacagatgctCCTTGCCCACTTTAAAGGACCGGATTGATCATGTGTTTGAATTGCACTTTTGTTTAGCATCGTATAAGAGTGGCCTCAATTTAAAATGCTGGGTGTTTTCAAGGGTGTTGTTAGTAGGCCTATATAGCAGGAGACTGGGAAGCCAGAGCTGCTCTTGAGAGGATGATATCCTGCCATGGCAGACCAAGCTGTAGCTACAGAAACTCTGTATGGCAGATCTCAAGTTTGATTGAGAAGCCTGTCTGTCAGCAGGAATATCAATAGCAAAAACAGAGCAGTTCACCTTTGCTTCTTACCTTGAGCCACAACCAGTATGAGACCCACATCCTCCTAATAAAATGGCCAGGCAGGGTTGTCGCTTTTCCATGAGTCTTCTCTCATTATGGAAAGTGTATCAGCTTCTAGTTGGTTGAAGTGTTAGAGAAAGTCCTGAATCTAAGTGTTCTGCAGTCTCGTCATCTTCTGCTTGTTAAATGTGTGGTGTTggggggtggtgtgtgtgtatgggggttggggggtcCTTTTGTGTCCCTTCTGGATCTGGAACGCACTGTTGCAGCCTGGTTGCAAGAAAAGCACTCATTTCTTTTGTTCTAAATACTCAGACTGTGGGCACCCTATTTTGTGGGTTCTGTTATTGTGGAGATGACTATAAGCCATTACAGTTTgcaatattgttgttttttgtttttgttttgtttttctgtcttaatatttttagtttcaaaataaaactgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105170 True 1485 lncRNA 0.40 1 8587569 8589053

Neighbor

gene id symbol gene type direction distance location
AMCG00021209 mtm1,LOC106577925 coding downstream 7554 8558232 ~ 8580015 (-)
AMCG00021191 NA coding downstream 38951 8541641 ~ 8548618 (-)
AMCG00021193 NA coding downstream 71647 8379989 ~ 8515922 (-)
AMCG00021192 col4a5,LOC106608922 coding downstream 214827 8361931 ~ 8372742 (-)
AMCG00021188 LOC107707922,LOC101154659,LOC108412583,LOC101071205 coding downstream 311939 8264949 ~ 8275630 (-)
AMCG00021208 NA coding upstream 1971 8591024 ~ 8603676 (-)
AMCG00021202 NA coding upstream 42619 8631672 ~ 8636891 (-)
AMCG00021201 NA coding upstream 172650 8761703 ~ 8763622 (-)
AMCG00021204 tmem185a,t185l,LOC106563673,LOC108429425 coding upstream 180280 8769333 ~ 8774394 (-)
AMCG00021203 NA coding upstream 213209 8802262 ~ 8818843 (-)
G84203 NA non-coding downstream 380019 8201759 ~ 8207550 (-)
G84184 NA non-coding downstream 470742 8064531 ~ 8116827 (-)
G84188 NA non-coding downstream 512871 8072093 ~ 8074698 (-)
G84156 NA non-coding downstream 607746 7978250 ~ 7979823 (-)
G84132 NA non-coding downstream 656053 7924021 ~ 7931516 (-)
G84305 NA non-coding upstream 167 8589220 ~ 8590488 (-)
G84307 NA non-coding upstream 112526 8701579 ~ 8701918 (-)
G84311 NA non-coding upstream 152108 8741161 ~ 8741413 (-)
G84332 hmgb3a,LOC106563671,LOC107750581,LOC107678073,LOC107561946 non-coding upstream 247222 8836275 ~ 8840659 (-)
G84514 NA non-coding upstream 1498651 10087704 ~ 10090475 (-)
AMCG00021153 NA other downstream 1465078 7115420 ~ 7122491 (-)
G83864 NA other downstream 2040992 6544492 ~ 6546577 (-)
G83761 NA other downstream 3836334 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 5868650 2677585 ~ 2718919 (-)
G83428 NA other downstream 6128190 2457001 ~ 2459379 (-)
AMCG00021249 NA other upstream 3504424 12093477 ~ 12100854 (-)
G84814 NA other upstream 3938040 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 4130811 12719864 ~ 12801586 (-)
G84952 NA other upstream 5038282 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 5280886 13869939 ~ 13917868 (-)

Expression


Co-expression Network