G84668


Basic Information

Item Value
gene id G84668
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 11169694 ~ 11169893 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105625
CTatcacaaaatcaaaagcaaggAGCAAACTGAAAGCTACTTTGGATGCTACTCTCCTTGTCAGTCTCTCACCCATTTCACCAAGACTTGATCTTATTATCTCCAAGAAGCAAGCCCAAGTGTCTCACTGAGGGTATGCAGAATATGCATTTTGTAGCAAGgtttgtctcagtatatatgtttttcctcATGTGAACTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105625 True 200 lncRNA 0.40 1 11169694 11169893

Neighbor

gene id symbol gene type direction distance location
AMCG00021235 NA coding upstream 747290 10382430 ~ 10422404 (+)
AMCG00021232 fgf16 coding upstream 813711 10344129 ~ 10355983 (+)
AMCG00021233 upp,uprt,LOC105023903 coding upstream 890543 10274489 ~ 10279151 (+)
AMCG00021227 NA coding upstream 1090919 10067228 ~ 10078775 (+)
AMCG00021229 NA coding upstream 1124974 10044181 ~ 10044720 (+)
AMCG00021245 NA coding downstream 622345 11792238 ~ 11819570 (+)
AMCG00021244 NA coding downstream 674616 11844509 ~ 11847471 (+)
AMCG00021254 NA coding downstream 936421 12106314 ~ 12107507 (+)
AMCG00021248 NA coding downstream 961302 12131195 ~ 12143466 (+)
AMCG00021255 NA coding downstream 1016116 12186009 ~ 12195780 (+)
G84666 NA non-coding upstream 18256 11151176 ~ 11151438 (+)
G84665 NA non-coding upstream 30203 11139277 ~ 11139491 (+)
G84662 NA non-coding upstream 132868 11036581 ~ 11036826 (+)
G84627 NA non-coding upstream 533425 10635396 ~ 10636269 (+)
G84549 NA non-coding upstream 808186 10279988 ~ 10361508 (+)
G84681 NA non-coding downstream 274938 11444831 ~ 11445150 (+)
G84690 NA non-coding downstream 521199 11691092 ~ 11691706 (+)
G84691 NA non-coding downstream 533902 11703795 ~ 11704000 (+)
G84759 NA non-coding downstream 931238 12101131 ~ 12101343 (+)
G84801 NA non-coding downstream 1166909 12336802 ~ 12337139 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 182520 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 450367 10470063 ~ 10719327 (+)
G84425 NA other upstream 1746275 9416267 ~ 9423419 (+)
G84301 NA other upstream 2536284 8631727 ~ 8633410 (+)
AMCG00021180 NA other upstream 3126395 8040170 ~ 8043299 (+)
G84749 NA other downstream 905452 12075345 ~ 12100707 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 2265414 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 2846240 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 2899437 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 4258584 15428477 ~ 15432364 (+)

Expression


Co-expression Network