G84690


Basic Information

Item Value
gene id G84690
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 11691092 ~ 11691706 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105647
GGGcaggacatattacagatctagttgctaggcagacatggaaTGTGTCCGATACCATAACTCCTAACACACTCGAGAGTTTCGGTTGACATATCTGCACAGTTTGCCTAGCAGTAGATGACGTGGGACTCtatcttatttctggtttgtctgaagagctgcatgtatattgtttatgttgtcagctctgagctgttcctcaaaatataatataaatatagggagttTGTGGTTTGACATTTTCAAGatgcagagtattatacagtgggtatatacaatacatagggggcaattttaccccaacagg

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU105647 True 307 lncRNA 0.40 2 11691092 11691706

Neighbor

gene id symbol gene type direction distance location
AMCG00021247 NA coding upstream 160621 10993784 ~ 11530471 (+)
AMCG00021235 NA coding upstream 1268688 10382430 ~ 10422404 (+)
AMCG00021232 fgf16 coding upstream 1335109 10344129 ~ 10355983 (+)
AMCG00021233 upp,uprt,LOC105023903 coding upstream 1411941 10274489 ~ 10279151 (+)
AMCG00021227 NA coding upstream 1612317 10067228 ~ 10078775 (+)
AMCG00021245 NA coding downstream 100532 11792238 ~ 11819570 (+)
AMCG00021244 NA coding downstream 152803 11844509 ~ 11847471 (+)
AMCG00021254 NA coding downstream 414608 12106314 ~ 12107507 (+)
AMCG00021248 NA coding downstream 439489 12131195 ~ 12143466 (+)
AMCG00021255 NA coding downstream 494303 12186009 ~ 12195780 (+)
G84681 NA non-coding upstream 245942 11444831 ~ 11445150 (+)
G84668 NA non-coding upstream 521199 11169694 ~ 11169893 (+)
G84666 NA non-coding upstream 539654 11151176 ~ 11151438 (+)
G84665 NA non-coding upstream 551601 11139277 ~ 11139491 (+)
G84662 NA non-coding upstream 654266 11036581 ~ 11036826 (+)
G84691 NA non-coding downstream 12089 11703795 ~ 11704000 (+)
G84759 NA non-coding downstream 409425 12101131 ~ 12101343 (+)
G84801 NA non-coding downstream 645096 12336802 ~ 12337139 (+)
G84803 NA non-coding downstream 646291 12337997 ~ 12338207 (+)
G84825 LOC107690093,LOC107593228,LOC107740173,LOC107680956,LOC107554828 non-coding downstream 1109123 12800829 ~ 12839209 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 703918 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 971765 10470063 ~ 10719327 (+)
G84425 NA other upstream 2267673 9416267 ~ 9423419 (+)
G84301 NA other upstream 3057682 8631727 ~ 8633410 (+)
AMCG00021180 NA other upstream 3647793 8040170 ~ 8043299 (+)
G84749 NA other downstream 383639 12075345 ~ 12100707 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 1743601 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 2324427 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 2377624 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 3736771 15428477 ~ 15432364 (+)

Expression


Co-expression Network