G84749


Basic Information

Item Value
gene id G84749
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 12075345 ~ 12100707 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105723
ACATGGACACTCACTGGGCCGGTGTACATCTTCTGCTTGGCCGGCTTGTGAGTGTCCATGTCCCGCAGGCCGCCCGACCCTACGCCCAGGCTATCAGcggcctgctgctgctgctgagccAGGTTCTTTCCCATATAGATATCCCGCACAGTCACTACCGTGAACAGCAGCAATGCCGTCAAGATACCCGCCTGGCTATATTCCGCCATCCCACCCCGGGTAAGGGGATGCCCTGCGTGTACTGTAAACAATCCCCCAATAGCAATAAATATCGCTGCAGATCTTAATGAGACCGAACCGGGACAGATCGCCCAGCCTCCCCCACCCAGACCTGCCGTCGACGAGAAACCG

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105723 True 351 TUCP 0.58 2 12075345 12100707

Neighbor

gene id symbol gene type direction distance location
AMCG00021244 NA coding upstream 227874 11844509 ~ 11847471 (+)
AMCG00021245 NA coding upstream 255775 11792238 ~ 11819570 (+)
AMCG00021247 NA coding upstream 544874 10993784 ~ 11530471 (+)
AMCG00021235 NA coding upstream 1652941 10382430 ~ 10422404 (+)
AMCG00021232 fgf16 coding upstream 1719362 10344129 ~ 10355983 (+)
AMCG00021254 NA coding downstream 5607 12106314 ~ 12107507 (+)
AMCG00021248 NA coding downstream 30488 12131195 ~ 12143466 (+)
AMCG00021255 NA coding downstream 85302 12186009 ~ 12195780 (+)
AMCG00021256 NA coding downstream 341508 12442215 ~ 12449758 (+)
AMCG00021262 LOC101466695,LOC100711741,LOC108231179,LOC106514543,LOC106949970,LOC106920031 coding downstream 1257551 13358258 ~ 13377435 (+)
G84691 NA non-coding upstream 371345 11703795 ~ 11704000 (+)
G84690 NA non-coding upstream 383639 11691092 ~ 11691706 (+)
G84681 NA non-coding upstream 630195 11444831 ~ 11445150 (+)
G84668 NA non-coding upstream 905452 11169694 ~ 11169893 (+)
G84666 NA non-coding upstream 923907 11151176 ~ 11151438 (+)
G84759 NA non-coding downstream 424 12101131 ~ 12101343 (+)
G84801 NA non-coding downstream 236095 12336802 ~ 12337139 (+)
G84803 NA non-coding downstream 237290 12337997 ~ 12338207 (+)
G84825 LOC107690093,LOC107593228,LOC107740173,LOC107680956,LOC107554828 non-coding downstream 700122 12800829 ~ 12839209 (+)
G84837 NA non-coding downstream 955475 13056182 ~ 13061763 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 1088171 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 1356018 10470063 ~ 10719327 (+)
G84425 NA other upstream 2651926 9416267 ~ 9423419 (+)
G84301 NA other upstream 3441935 8631727 ~ 8633410 (+)
AMCG00021180 NA other upstream 4032046 8040170 ~ 8043299 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 1334600 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 1915426 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 1968623 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 3327770 15428477 ~ 15432364 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 3962792 16063499 ~ 16073621 (+)

Expression


Co-expression Network