G84803


Basic Information

Item Value
gene id G84803
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 12337997 ~ 12338207 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105794
gtcagtatctggtgtggccaccagctgcattaagtactgcagtgcatctcctcctcatggactgcaccagatttgccagttcttgctgtgagatgttaccccactcttccaccaaggcacttgcaagttcccggacatttctggggggaatggccctagccctcaccctccgatccaacaggtcccagacgtgctcaatgggattgagatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105794 True 211 lncRNA 0.55 1 12337997 12338207

Neighbor

gene id symbol gene type direction distance location
AMCG00021255 NA coding upstream 142217 12186009 ~ 12195780 (+)
AMCG00021248 NA coding upstream 194531 12131195 ~ 12143466 (+)
AMCG00021254 NA coding upstream 230490 12106314 ~ 12107507 (+)
AMCG00021244 NA coding upstream 490526 11844509 ~ 11847471 (+)
AMCG00021245 NA coding upstream 518427 11792238 ~ 11819570 (+)
AMCG00021256 NA coding downstream 104008 12442215 ~ 12449758 (+)
AMCG00021262 LOC101466695,LOC100711741,LOC108231179,LOC106514543,LOC106949970,LOC106920031 coding downstream 1020051 13358258 ~ 13377435 (+)
AMCG00021264 NA coding downstream 1064427 13402634 ~ 13407007 (+)
AMCG00021265 NA coding downstream 1081605 13419812 ~ 13433529 (+)
AMCG00021263 taf7l,taf7 coding downstream 1104578 13442785 ~ 13447518 (+)
G84801 NA non-coding upstream 858 12336802 ~ 12337139 (+)
G84759 NA non-coding upstream 236654 12101131 ~ 12101343 (+)
G84691 NA non-coding upstream 633997 11703795 ~ 11704000 (+)
G84690 NA non-coding upstream 646291 11691092 ~ 11691706 (+)
G84681 NA non-coding upstream 892847 11444831 ~ 11445150 (+)
G84825 LOC107690093,LOC107593228,LOC107740173,LOC107680956,LOC107554828 non-coding downstream 462622 12800829 ~ 12839209 (+)
G84837 NA non-coding downstream 717975 13056182 ~ 13061763 (+)
G84923 NA non-coding downstream 1233564 13571771 ~ 13572447 (+)
G84936 nox1,LOC106611713 non-coding downstream 1261998 13600205 ~ 13601928 (+)
G84938 NA non-coding downstream 1265651 13603858 ~ 13604159 (+)
G84749 NA other upstream 237290 12075345 ~ 12100707 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 1350823 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 1618670 10470063 ~ 10719327 (+)
G84425 NA other upstream 2914578 9416267 ~ 9423419 (+)
G84301 NA other upstream 3704587 8631727 ~ 8633410 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 1097100 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 1677926 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 1731123 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 3090270 15428477 ~ 15432364 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 3725292 16063499 ~ 16073621 (+)

Expression


Co-expression Network