G84837


Basic Information

Item Value
gene id G84837
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13056182 ~ 13061763 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105833
CTGATGTAATAGTCATTCCTGATAAGAAGAAGATGCTGCAGCACTGAGAGGAAATAGTTCTCTGACCCTGTGTCTTTCACCATGTTTGACAGCAAATGGTAGACTTCATTCATATCGTCCATTTCAGCTCGGATGTCATCAAGACGGTgggataattcaattaaatcctCATCCTTGTTTTCATTGAACACCTTCAACTGGATATCGAGCTCCTCTGTCTCTTTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105833 True 227 lncRNA 0.41 2 13056182 13061763

Neighbor

gene id symbol gene type direction distance location
AMCG00021256 NA coding upstream 606424 12442215 ~ 12449758 (+)
AMCG00021255 NA coding upstream 860402 12186009 ~ 12195780 (+)
AMCG00021248 NA coding upstream 912716 12131195 ~ 12143466 (+)
AMCG00021254 NA coding upstream 948675 12106314 ~ 12107507 (+)
AMCG00021244 NA coding upstream 1208711 11844509 ~ 11847471 (+)
AMCG00021262 LOC101466695,LOC100711741,LOC108231179,LOC106514543,LOC106949970,LOC106920031 coding downstream 296495 13358258 ~ 13377435 (+)
AMCG00021264 NA coding downstream 340871 13402634 ~ 13407007 (+)
AMCG00021265 NA coding downstream 358049 13419812 ~ 13433529 (+)
AMCG00021263 taf7l,taf7 coding downstream 381022 13442785 ~ 13447518 (+)
AMCG00021266 LOC107740154 coding downstream 386833 13448596 ~ 13454852 (+)
G84825 LOC107690093,LOC107593228,LOC107740173,LOC107680956,LOC107554828 non-coding upstream 216973 12800829 ~ 12839209 (+)
G84803 NA non-coding upstream 717975 12337997 ~ 12338207 (+)
G84801 NA non-coding upstream 719043 12336802 ~ 12337139 (+)
G84759 NA non-coding upstream 954839 12101131 ~ 12101343 (+)
G84691 NA non-coding upstream 1352182 11703795 ~ 11704000 (+)
G84923 NA non-coding downstream 510008 13571771 ~ 13572447 (+)
G84936 nox1,LOC106611713 non-coding downstream 538442 13600205 ~ 13601928 (+)
G84938 NA non-coding downstream 542095 13603858 ~ 13604159 (+)
G84962 NA non-coding downstream 619174 13680937 ~ 13685245 (+)
G85006 NA non-coding downstream 799907 13861670 ~ 13862498 (+)
G84749 NA other upstream 955475 12075345 ~ 12100707 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 2069008 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 2336855 10470063 ~ 10719327 (+)
G84425 NA other upstream 3632763 9416267 ~ 9423419 (+)
G84301 NA other upstream 4422772 8631727 ~ 8633410 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 373544 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 954370 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 1007567 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 2366714 15428477 ~ 15432364 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 3001736 16063499 ~ 16073621 (+)

Expression


Co-expression Network