G84923


Basic Information

Item Value
gene id G84923
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13571771 ~ 13572447 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105947
TTCCAATAGtaacaattaaatgtgtaaaaactaCAATGCTTTCCTCTCATtcatattacatttcatatttcttcAATGAGATTTCTTTTtacaatgcaataatacaattatttctggCAGAAGACTGATTCCCCAAATGACTCTAAAACCTTCCTGTCTTTTAAACACATTCATCTCAGTGCAATATGAAAGATTCATGTCATTTATATATTGAATGTACCGATACAATTCAGAACATTGATTAATATATCGACTCTGATCACTTATCTGGGTATATATTAAGCACTTGTTCTCAAGTTTCCCTTTCATTTCCTGTATCATCTTTAGTTTGTTTAGAAGGGCATCATATCATTCACTAAAtgctatacatttgtgtatatgtTCAGCTTGTAAACGTCACATCCTTACCACAATAATAACATACACTGCTGTCGGTGTAACCATCAATAATAGAGAAACATACAATACCTTATACAGGCCAACCTGTTTCTCTGAACACACATTTGAAGACCCCTCTTTggaacaatacattatttttacatttctttcatgtaaaaataatatatttgggTTGAACTGTGAGCACCTGAGTGCTGAAGCCTAGTTGTAAGATGTCCTTAGagatctacactcacctaaaggattattaggaacacctgttcaatttctcattaNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105947 True 677 lncRNA 0.32 1 13571771 13572447

Neighbor

gene id symbol gene type direction distance location
AMCG00021266 LOC107740154 coding upstream 116919 13448596 ~ 13454852 (+)
AMCG00021263 taf7l,taf7 coding upstream 124253 13442785 ~ 13447518 (+)
AMCG00021265 NA coding upstream 138242 13419812 ~ 13433529 (+)
AMCG00021264 NA coding upstream 164764 13402634 ~ 13407007 (+)
AMCG00021262 LOC101466695,LOC100711741,LOC108231179,LOC106514543,LOC106949970,LOC106920031 coding upstream 194336 13358258 ~ 13377435 (+)
AMCG00021277 NA coding downstream 14447 13586894 ~ 13599015 (+)
AMCG00021276 NA coding downstream 50402 13622849 ~ 13630470 (+)
AMCG00021275 NA coding downstream 77816 13650263 ~ 13662469 (+)
AMCG00021279 NA coding downstream 120921 13693368 ~ 13704090 (+)
AMCG00021280 zdhhc9,LOC105893011 coding downstream 159249 13731696 ~ 13752149 (+)
G84837 NA non-coding upstream 510008 13056182 ~ 13061763 (+)
G84825 LOC107690093,LOC107593228,LOC107740173,LOC107680956,LOC107554828 non-coding upstream 732562 12800829 ~ 12839209 (+)
G84803 NA non-coding upstream 1233564 12337997 ~ 12338207 (+)
G84801 NA non-coding upstream 1234632 12336802 ~ 12337139 (+)
G84759 NA non-coding upstream 1470428 12101131 ~ 12101343 (+)
G84936 nox1,LOC106611713 non-coding downstream 27758 13600205 ~ 13601928 (+)
G84938 NA non-coding downstream 31411 13603858 ~ 13604159 (+)
G84962 NA non-coding downstream 108490 13680937 ~ 13685245 (+)
G85006 NA non-coding downstream 289223 13861670 ~ 13862498 (+)
G85013 LOC100846954 non-coding downstream 297115 13869562 ~ 13917871 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 134363 13435307 ~ 13437408 (+)
G84749 NA other upstream 1471064 12075345 ~ 12100707 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 2584597 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 2852444 10470063 ~ 10719327 (+)
G84425 NA other upstream 4148352 9416267 ~ 9423419 (+)
AMCG00021296 NA other downstream 443686 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 496883 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 1856030 15428477 ~ 15432364 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 2491052 16063499 ~ 16073621 (+)
G85764 LOC103366846,LOC106930986 other downstream 3017734 16590181 ~ 16592973 (+)

Expression


Co-expression Network