G84938


Basic Information

Item Value
gene id G84938
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13603858 ~ 13604159 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105971
cagtgagagaccgaataacaacaaaaaaatccagaaaaacgcatttcaaaaaagttatacattgatttgcatgttaatgagggaaaaaagtatttgaccccttcgacttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattatggtttcgaggctgacgtttggcaactcgaaccgaCAGCTCcatccacagattttctatggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105971 True 280 lncRNA 0.43 2 13603858 13604159

Neighbor

gene id symbol gene type direction distance location
AMCG00021277 NA coding upstream 4843 13586894 ~ 13599015 (+)
AMCG00021266 LOC107740154 coding upstream 149006 13448596 ~ 13454852 (+)
AMCG00021263 taf7l,taf7 coding upstream 156340 13442785 ~ 13447518 (+)
AMCG00021265 NA coding upstream 170329 13419812 ~ 13433529 (+)
AMCG00021264 NA coding upstream 196851 13402634 ~ 13407007 (+)
AMCG00021276 NA coding downstream 18690 13622849 ~ 13630470 (+)
AMCG00021275 NA coding downstream 46104 13650263 ~ 13662469 (+)
AMCG00021279 NA coding downstream 89209 13693368 ~ 13704090 (+)
AMCG00021280 zdhhc9,LOC105893011 coding downstream 127537 13731696 ~ 13752149 (+)
AMCG00021281 NA coding downstream 244073 13848232 ~ 13850457 (+)
G84936 nox1,LOC106611713 non-coding upstream 1930 13600205 ~ 13601928 (+)
G84923 NA non-coding upstream 31411 13571771 ~ 13572447 (+)
G84837 NA non-coding upstream 542095 13056182 ~ 13061763 (+)
G84825 LOC107690093,LOC107593228,LOC107740173,LOC107680956,LOC107554828 non-coding upstream 764649 12800829 ~ 12839209 (+)
G84803 NA non-coding upstream 1265651 12337997 ~ 12338207 (+)
G84962 NA non-coding downstream 76778 13680937 ~ 13685245 (+)
G85006 NA non-coding downstream 257511 13861670 ~ 13862498 (+)
G85013 LOC100846954 non-coding downstream 265403 13869562 ~ 13917871 (+)
G85019 NA non-coding downstream 292760 13896919 ~ 13899981 (+)
G85056 NA non-coding downstream 358950 13963109 ~ 13964224 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 166450 13435307 ~ 13437408 (+)
G84749 NA other upstream 1503151 12075345 ~ 12100707 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 2616684 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 2884531 10470063 ~ 10719327 (+)
G84425 NA other upstream 4180439 9416267 ~ 9423419 (+)
AMCG00021296 NA other downstream 411974 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 465171 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 1824318 15428477 ~ 15432364 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 2459340 16063499 ~ 16073621 (+)
G85764 LOC103366846,LOC106930986 other downstream 2986022 16590181 ~ 16592973 (+)

Expression


Co-expression Network