G85455


Basic Information

Item Value
gene id G85455
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 15561745 ~ 15562917 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU106656
tgcaaatttgctAATTATCTctgagtccagatcattaatatagcttagaaaaagcaaaggccctagtactgatccctgtggaactccactaacaacctcactccagttagaagcgactcctctaatcgacaccctctgtttcctagacatcaaccagttcataatccatctacttacattaccctgaatgcctacagcttccaatctgaggatcagtctttggtgtggaaagAATCCTTGGTTACCTATAGCTAGgCTTTTTGCTGGAGCGCTGTAAAGTCGATCATATATTATCGAACTCACCAGAGTTCTACGTTGGTTCAGTCGAGCACTGGTCTGCCTCAAACGCCTGTCTCCAGTTAAGAAGTACTGATCTACAAGTCATCTGAAAAAGACTCTGAAGGAGACAAGGCACAGAGGGAGCTGGAGAAGCAGACCATGGCCATATATGTGATACGAAGGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106656 True 466 lncRNA 0.44 3 15561745 15562917

Neighbor

gene id symbol gene type direction distance location
AMCG00021354 LOC105026395,LOC107751966,LOC105912120,LOC107601099,LOC103357578,LOC100696750 coding upstream 8743 15547281 ~ 15553002 (+)
AMCG00021350 mospd1,LOC107601124,LOC107560686,LOC107744569 coding upstream 87243 15468503 ~ 15474502 (+)
AMCG00021346 NA coding upstream 181622 15353756 ~ 15380123 (+)
AMCG00021348 NA coding upstream 226083 15325459 ~ 15335662 (+)
AMCG00021340 NA coding upstream 371654 15157183 ~ 15190091 (+)
AMCG00021359 NA coding downstream 8633 15571550 ~ 15599716 (+)
AMCG00021358 NA coding downstream 71722 15634639 ~ 15644985 (+)
AMCG00021360 NA coding downstream 90827 15653744 ~ 15660257 (+)
AMCG00021361 LOC106586057,LOC106612107,LOC105026369 coding downstream 177818 15740735 ~ 15752170 (+)
AMCG00021366 NA coding downstream 217072 15779989 ~ 15784971 (+)
G85440 NA non-coding upstream 32073 15487242 ~ 15529672 (+)
G85412 NA non-coding upstream 151135 15405776 ~ 15410610 (+)
G85380 NA non-coding upstream 300780 15256448 ~ 15260965 (+)
G85381 NA non-coding upstream 302283 15257959 ~ 15259462 (+)
G85345 NA non-coding upstream 433780 15127289 ~ 15127965 (+)
G85497 NA non-coding downstream 12632 15575549 ~ 15576518 (+)
G85507 NA non-coding downstream 190165 15753082 ~ 15755432 (+)
G85552 NA non-coding downstream 357822 15920739 ~ 15922721 (+)
G85623 NA non-coding downstream 577606 16140523 ~ 16169886 (+)
G85674 NA non-coding downstream 726832 16289749 ~ 16292193 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 129381 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 1488620 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 1528188 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 2124337 13435307 ~ 13437408 (+)
G84749 NA other upstream 3461038 12075345 ~ 12100707 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 500582 16063499 ~ 16073621 (+)
G85764 LOC103366846,LOC106930986 other downstream 1027264 16590181 ~ 16592973 (+)
G85787 NA other downstream 1093727 16656644 ~ 16714038 (+)
G85869 NA other downstream 1434960 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 1907408 17470325 ~ 17473396 (+)

Expression


Co-expression Network