G85592


Basic Information

Item Value
gene id G85592
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16011231 ~ 16011702 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU106831
TTTCACCGCTATATATGAATTAAACTTCTGCAGCTACAGCTGTTGTCTAAAGGCGAACaatatttctgaattattttgaaCAACCCTCCAGTGCTGATTTTTCACCCCCCTTCAAACTCGTAGGCCCGATACACATCCCCACCCCCATTCCAATCATCACCTACACCGCTCAACTCACCCGCATCCGCACTTCGTAGGTGGTAAAGCGGTTCCTCCCTACCCCGATGGTCTGTGGGTCGTAAACGTCTATTTCCAGAAAGTTACTAGGAGGCCCGTAGGCGTCCGTGAGGTCCTGAGGTTTGGAGTTTAACCGGCGAGTGTCAGCTACTGTAGGCTCCGACATTTTCAGCTTCGAGCAGCCACCCCGGGGTCCGCGAAGGCAGCGAGACAGCAGCAGAGTAGAGTAGACCCGCCCCCTCCGCAGCACCCTGGCCAATGGGCATCGAGGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106831 True 451 lncRNA 0.53 2 16011231 16011702

Neighbor

gene id symbol gene type direction distance location
AMCG00021376 NA coding downstream 3152 16002219 ~ 16008079 (-)
AMCG00021364 NA coding downstream 140701 15862894 ~ 15870530 (-)
AMCG00021355 LOC107751967,LOC107560772,LOC107661382,LOC107658087,LOC107601119 coding downstream 476097 15528669 ~ 15535134 (-)
AMCG00021357 hprt1,LOC105912559,LOC107601120 coding downstream 485048 15515619 ~ 15526183 (-)
AMCG00021356 NA coding downstream 521834 15480851 ~ 15489397 (-)
AMCG00021382 rab39b,LOC103034714,LOC108428007,LOC108278912,LOC106602960,LOC106609056 coding upstream 108486 16120188 ~ 16121592 (-)
AMCG00021388 rbmx2 coding upstream 198036 16209738 ~ 16212465 (-)
AMCG00021392 NA coding upstream 204734 16216436 ~ 16217455 (-)
AMCG00021393 LOC106603592,LOC106567886,LOC105023927,LOC107587290,LOC103395138,LOC100711063,LOC102300059 coding upstream 345563 16357265 ~ 16359007 (-)
AMCG00021396 NA coding upstream 427734 16439436 ~ 16452644 (-)
G85590 NA non-coding downstream 10010 15993252 ~ 16001221 (-)
G85568 NA non-coding downstream 77054 15921022 ~ 15934177 (-)
G85569 NA non-coding downstream 81452 15924958 ~ 15929779 (-)
G85543 NA non-coding downstream 107864 15863731 ~ 15903367 (-)
G85535 NA non-coding downstream 149284 15804736 ~ 15861947 (-)
G85658 pof1b non-coding upstream 167460 16179162 ~ 16266798 (-)
G85716 NA non-coding upstream 459850 16471552 ~ 16471759 (-)
G85771 NA non-coding upstream 554015 16565717 ~ 16566021 (-)
G85802 NA non-coding upstream 679865 16691567 ~ 16757611 (-)
G85824 NA non-coding upstream 796104 16807806 ~ 16809320 (-)
AMCG00021304 NA other downstream 1939906 14057918 ~ 14071325 (-)
G85115 NA other downstream 1959334 14049974 ~ 14051897 (-)
AMCG00021302 NA other downstream 2060187 13948307 ~ 13951044 (-)
G85037 LOC100846954 other downstream 2093363 13869939 ~ 13917868 (-)
G84952 NA other downstream 2383484 13627335 ~ 13627747 (-)
AMCG00021387 NA other upstream 222615 16234317 ~ 16242655 (-)
AMCG00021412 NA other upstream 635437 16647139 ~ 16649940 (-)
AMCG00021435 hdx,LOC107572093 other upstream 1274547 17286249 ~ 17303470 (-)
G85953 NA other upstream 1407902 17419604 ~ 17423418 (-)
G86010 NA other upstream 1535460 17547162 ~ 17552766 (-)

Expression


Co-expression Network