Gene
RNA
| Item | Value |
|---|---|
| gene id | G85802 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 16691567 ~ 16757611 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: E3 ubiquitin-protein ligase arih1l |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU107100 | True | 926 | lncRNA | 0.37 | 2 | 16691567 | 16757611 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021409 | LOC108443111 | coding | downstream | 17391 | 16656644 ~ 16674176 (-) |
| AMCG00021410 | LOC104920593,LOC104965768,LOC103366846 | coding | downstream | 100958 | 16581562 ~ 16590609 (-) |
| AMCG00021411 | vamp7 | coding | downstream | 119073 | 16567139 ~ 16572494 (-) |
| AMCG00021404 | NA | coding | downstream | 141473 | 16545753 ~ 16550094 (-) |
| AMCG00021406 | NA | coding | downstream | 187188 | 16503741 ~ 16504379 (-) |
| AMCG00021420 | itm2a | coding | upstream | 85152 | 16842763 ~ 16850257 (-) |
| AMCG00021422 | chmp1b,LOC101476317 | coding | upstream | 141765 | 16899376 ~ 16908983 (-) |
| AMCG00021428 | NA | coding | upstream | 236935 | 16994546 ~ 16995556 (-) |
| AMCG00021426 | NA | coding | upstream | 245758 | 17003369 ~ 17021275 (-) |
| AMCG00021427 | NA | coding | upstream | 264934 | 17022545 ~ 17023139 (-) |
| G85771 | NA | non-coding | downstream | 125546 | 16565717 ~ 16566021 (-) |
| G85716 | NA | non-coding | downstream | 219808 | 16471552 ~ 16471759 (-) |
| G85658 | pof1b | non-coding | downstream | 424769 | 16179162 ~ 16266798 (-) |
| G85580 | NA | non-coding | downstream | 670825 | 15976565 ~ 16020742 (-) |
| G85824 | NA | non-coding | upstream | 50195 | 16807806 ~ 16809320 (-) |
| G85837 | NA | non-coding | upstream | 65205 | 16822816 ~ 16823079 (-) |
| G85889 | NA | non-coding | upstream | 312233 | 17069844 ~ 17071130 (-) |
| G85904 | NA | non-coding | upstream | 329111 | 17086722 ~ 17087718 (-) |
| G85905 | NA | non-coding | upstream | 330322 | 17087933 ~ 17088835 (-) |
| AMCG00021412 | NA | other | downstream | 41627 | 16647139 ~ 16649940 (-) |
| AMCG00021387 | NA | other | downstream | 448912 | 16234317 ~ 16242655 (-) |
| AMCG00021304 | NA | other | downstream | 2620242 | 14057918 ~ 14071325 (-) |
| G85115 | NA | other | downstream | 2639670 | 14049974 ~ 14051897 (-) |
| AMCG00021302 | NA | other | downstream | 2740523 | 13948307 ~ 13951044 (-) |
| AMCG00021435 | hdx,LOC107572093 | other | upstream | 528638 | 17286249 ~ 17303470 (-) |
| G85953 | NA | other | upstream | 661993 | 17419604 ~ 17423418 (-) |
| G86010 | NA | other | upstream | 789551 | 17547162 ~ 17552766 (-) |
| AMCG00021444 | NA | other | upstream | 823631 | 17581242 ~ 17585441 (-) |
| G86049 | NA | other | upstream | 1168488 | 17926099 ~ 17926708 (-) |
