G85938


Basic Information

Item Value
gene id G85938
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17248967 ~ 17290861 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107266
tttatttattaatttatatatatatatatatatatatatataaaaaaaaaatatttgttcacaattttttttgttttgaagtttgCACATGGGCTAGACGGGGTGTTTCTCTTGTGGTTTTTCTTTTAGCTTCAACAGTTGCCCAAGGTTTTAATCATCATTGTGGgcagatcaaaaaaaaaaaaagagaactggtcaaaaactaacaaaccaaGAAGGTCAATTAATGTGTATTGTTGCACATTGAGGTGCATGTAGGTACAGTATTATCCCTGAAGGGTCAAAGGCCAGGGGGAAGGATGGGAATGGGACAAGGGTCAGGGAACTTGGAGCgaatgagggaggaggaggtcCAGAGGACCCGTTTGCCTCGGCATCATTACTCTCTTCAATGACATTGtggaaattgtattatattgtatttatttcgtttaattttttaaaatctatttttctttcGAGGTCTGtatatattgacattaaagatcATTATTGATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107266 True 500 lncRNA 0.34 2 17248967 17290861

Neighbor

gene id symbol gene type direction distance location
AMCG00021425 NA coding downstream 206460 17035957 ~ 17042507 (-)
AMCG00021427 NA coding downstream 225828 17022545 ~ 17023139 (-)
AMCG00021426 NA coding downstream 227692 17003369 ~ 17021275 (-)
AMCG00021428 NA coding downstream 253411 16994546 ~ 16995556 (-)
AMCG00021422 chmp1b,LOC101476317 coding downstream 339984 16899376 ~ 16908983 (-)
AMCG00021437 NA coding upstream 165999 17456860 ~ 17475633 (-)
AMCG00021446 NA coding upstream 221701 17512562 ~ 17517667 (-)
AMCG00021445 NA coding upstream 227520 17518381 ~ 17539713 (-)
AMCG00021447 NA coding upstream 297677 17588538 ~ 17589461 (-)
AMCG00021448 prps1b,prps1,LOC103391169,LOC108413289,LOC104923196,LOC107684920 coding upstream 325444 17616305 ~ 17632305 (-)
G85909 NA non-coding downstream 120302 17128464 ~ 17128665 (-)
G85905 NA non-coding downstream 160132 17087933 ~ 17088835 (-)
G85904 NA non-coding downstream 161249 17086722 ~ 17087718 (-)
G85889 NA non-coding downstream 177837 17069844 ~ 17071130 (-)
G85837 NA non-coding downstream 425888 16822816 ~ 16823079 (-)
G85952 NA non-coding upstream 127136 17417997 ~ 17418548 (-)
G85977 NA non-coding upstream 168866 17459727 ~ 17459941 (-)
G85985 NA non-coding upstream 185843 17476704 ~ 17476904 (-)
G86000 NA non-coding upstream 222336 17513197 ~ 17513620 (-)
G86012 NA non-coding upstream 235892 17526753 ~ 17527139 (-)
AMCG00021412 NA other downstream 599027 16647139 ~ 16649940 (-)
AMCG00021387 NA other downstream 1006312 16234317 ~ 16242655 (-)
AMCG00021304 NA other downstream 3177642 14057918 ~ 14071325 (-)
G85115 NA other downstream 3197070 14049974 ~ 14051897 (-)
AMCG00021302 NA other downstream 3297923 13948307 ~ 13951044 (-)
G85953 NA other upstream 128743 17419604 ~ 17423418 (-)
G86010 NA other upstream 256301 17547162 ~ 17552766 (-)
AMCG00021444 NA other upstream 290381 17581242 ~ 17585441 (-)
G86049 NA other upstream 635238 17926099 ~ 17926708 (-)
AMCG00021460 rhog,LOC101076287,LOC107396352,LOC104923191,LOC105923887 other upstream 950376 18241237 ~ 18248894 (-)

Expression


Co-expression Network